Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0519 ATGGATTTAGAGTTGCAATATCAAGAAGAGTTCTGGAGGAACTCAAGGGGAGTGCAACTATTCACTTGCAAATGGTTGCCATTATCTTCTCCAAAGGCTCTGGTTTTTCTTTGCCATGGCTATGGCATGGAATGCAGTCGTTTCATGAGAGAATGTGGAGTAAGGCTAGCTTGTGCCAAATATGCTGTGTATGGTATTGATTATGAAGGACATGGACGTTCTGAAGGTGTTCGTTGTTACATTAAGAAGTTTAATAACATTGTTAATGACTGTTATGACTTTTTCAAGTCAATTAGTGATCTCGAAGAGTATAAGGGAAAGGCTAGGTTTTTGTATGGAGAGTCCATGGGTGGAGCAGTTAGTCTACTTTTGCATCAAAAAGACCCTTCTTTTTGGGACGGTTCCGTTCTTGTCGCACCCATGTGTAAGATATCAGAGAAGGTGAAGCCACACCAAATTGTGATCAACATACTGACTAAAGTAGAAGATATCATACCAAAGTGGAAGATTGTTCCCACAAAGGATGTCATCAATTTAGCCTTCAAAGATCCAGCCAAAAGAGAAAGGATAAGGAAAAACAAGTTGATTTACCAGGACAAACCCAGGTTAAAAACAGCTCTAGAAATGTTAAGAACCAGCATGAATCTTGAAGACACCTTATACAAGGTAACCATGCCATTTTTTGTAATGCATGGAGAAACAGATACAGTGACAGATCCAGAAGTAAGTAGAGCATTATATGAGAGAGCCAGTAGCAAAGACAAGACAATTAAATTGTACCCTGGTATGTGGCATGGTTTAACATCTGGTGAGCCTGATGACAACATTGAAAAAGTCTTTGAAGACATCATAACATGGCTTGACAAACACGCCAACAATAATGCTGCTGCTTATGAGACTTCACAAACAATTGAGACTTGTGACACGGAGAATTTCACACCAGTTGTATCATCAGCAAAGACTTTGAAGGAGACACAAAGGCGAAAATTCTATCTTTGTGGGTTGAGAGGAAGTCGTTTGTTACATCACTCGGCAACATAG 1041 0.3967 MDLELQYQEEFWRNSRGVQLFTCKWLPLSSPKALVFLCHGYGMECSRFMRECGVRLACAKYAVYGIDYEGHGRSEGVRCYIKKFNNIVNDCYDFFKSISDLEEYKGKARFLYGESMGGAVSLLLHQKDPSFWDGSVLVAPMCKISEKVKPHQIVINILTKVEDIIPKWKIVPTKDVINLAFKDPAKRERIRKNKLIYQDKPRLKTALEMLRTSMNLEDTLYKVTMPFFVMHGETDTVTDPEVSRALYERASSKDKTIKLYPGMWHGLTSGEPDDNIEKVFEDIITWLDKHANNNAAAYETSQTIETCDTENFTPVVSSAKTLKETQRRKFYLCGLRGSRLLHHSAT* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0519 346 PRINTS Alpha/beta hydrolase fold signature 60 75 IPR000073 -
Tpr6g0519 346 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Tpr6g0519 346 PRINTS Alpha/beta hydrolase fold signature 227 241 IPR000073 -
Tpr6g0519 346 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 8 304 - -
Tpr6g0519 346 Gene3D alpha/beta hydrolase 4 299 IPR029058 -
Tpr6g0519 346 PANTHER PHOSPHOLIPASE-RELATED 8 304 - -
Tpr6g0519 346 Pfam Serine aminopeptidase, S33 30 272 IPR022742 -
Tpr6g0519 346 SUPERFAMILY alpha/beta-Hydrolases 6 291 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0519 Tpr-Chr6 4245069 4250482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0519 48 346 Acyl Lipid Metabolism Gene Families AT2G47630 65.781 1.01e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0519 K18368 - vvi:100246971 527.324