Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0512 ATGAACCCTTCGAAACTTCCGCGCCGGAAAGTTACTCAGGCAAACGGCGATGACTCCGGAGACAAACTCGACCAGCTTCTTCTATCATCCGCTATATGCAACAACGAAGACTTAGGCTCCTTCGTCCGCAAAGCTTTCGCTTCCGGCAAACCAGAAACTCTCCAACATCACCTCAAACACTTCGCTCGCTCCAAAGAATCGGAGATCGAAGAAGTCTGTAAAGCACACTACCAAGACTTCATCCTCGCCGTCGATGATCTCCGATCGCTTCTCTCCGACGTTGAATCTCTCAAGTCATCACTCTCCGATTCAAATTCAAAACTCCAGTCCGTTGCTCGTCCGCTTCTCACCTCTCTCGATTCCTTCGTCGAAGCACGAAACGTTTCGAAAAACGTTAATCTCGCAATCGATTCAGTTGAAGCGTGTGTTCAGTTAATGGAAGTTTGTTCACGCGCTAACAGTTATCTCTCCGAGGACAAATTCTACATGGCGTTGAAGTGTGTTGATGCAATCGAGAGAAATTACTTGGATAAAACGCAGTCGTCGAAGTTGAAGAAGATTCTTGAGAAGAAGATTCCAGAGATTCGTTCTTACATAGAGAGAAAAGTGAACAAAGAGTTCGGTGATTGGTTAGTTAAGATCCGTGTTGTGAGTCGTAATTTAGGTCAATTGGCAATTGGTCAAGCTTCATCAGCGAGACAGAGAGAAGAAGATCTTAGAATCAAACAGCGTCAAGCGGAGGAACAGAGTAGACTCAGTGTTAGGGATTGTATTTATGCTTTGGAGGAAGAAGATGAAGATGGAATCGTTGCTGGGATCGGAGATGACGGTAACAGTAATGGTGGTGGTGGTGGAGGTTTGGGATTTGATTTGACTCCGTTGTATAGAGCTTACCATATTCACCAAACGTTAGGATTAGAGGATGGATTTAAGCAATATTATTTTGAGAATAGGAAACTTCAGTTGACTTCGGATTTCCAGGTATCGTCTATGACGCCTTTTCTTGAATCTCATCAAACGTTCTTTGCACAGATTGCAGGTTTTTTTGTGGTGGAGGATCGTGTGTTGAGAACCGGTGGTGGTTTGATATCGAAAATGGAAGTTGAGAATTTATGGGAAATTGCTGTTAGCAAAATGTGTTCTGTGTTGGAGGATCAATTTTCTAGAATGCAAACTGCTAATCATCTTTTGTTGATTAAGGATTATGTGAGTTTATTAGGAGTAACATTGCGTAGATTTGGTTACCCGATAGATGCCTTGCTTGATGTTTTAAGCAAACATAGGGATAAGTATCATGAATTGCTCTTGTCAGATTGTAGGAAGCAGATAGCTGAGGCTATAGGTGGTGATAAATTTGAGCAGATGTATATGAAGAAAGAGTATGAGTATTCTATGAATGTGCTTTCTTTTCAGATTCAGACAACGGATATTATACCTGCTTTTCCTTACGTGGCACCGTTTTCGTCCACGGTGCCTGATTGTTGTCGTATTGTGCGGTCATTTATTGAGGATTCTGTTAGTTTCATGTCATATGGTGGGCAGCTTGAGTTCTATGATGTTGTTAAGAAATATTTAGATAAGCTTTTGAGTGAGGTTTTAGATGAATCTTTGTTAAAGCTTATTAATACCTCGGTTAGTGGTGTCTCCCAGGCAATGCAAATGGCAGCAAATATGGCTGTTATGGAGCGTGCGTGTGATTTTTTCTTTCGCCACGCGGCACAGCTTTCAGGGGTTCCTTTGAGAATGGTGGAGAGAAGCCGGAGGCAGTTTCCTCTGAGGAAAGCCCGTGATGCTGCGGAAGAGACGCTGTCAGGGCTGCTCAAAGCCAAAGTTGATGGATTTATGACATTGATTGAGAATGTAAATTGGATGACCGATGATCCGCCTCAAGATGGAAATGAATATGTAAATGAGGTCATAATGTATTTGGAAACTGTGGTTTCGACTACTGCATCACAGATATTGCCAACTCAAGTTCTTAAAAGAGTTTTACTGGATGTTATTTCTCATATATCGGAGATGATTGTTGGGACTTTAGTTAGTGATTCTGTTAAGAGGTTTAGTGTCAATGCCATAACTGGAATTGATACAGACATCAAGCTCTTAGAATCTTTTGCTGAATCTCAGGGAACCCATTTATCTGATGGGGATGCTAATCAGTTGAAATTGGCACTTGCTGAGTCAAGGCAAATGGTTAATTTGCTAGTAAGCAATCATCCCGAGAATTTCCTGAATCCAGTGATCAGGGAGAGGAGTTACAATGCTTTGGATCACAAGAAAGTGGTGATTGTTTCAGAAAAGTTGAAGGATCCTTCAGATCGACTCTTTGGAACCTTTGGTAGTCGAGGGTCCAGGCAGAATCCAAAAAAGAAATCACTGGATACATTGATAAAAAGACTAAGGGATGTTAGCTGA 2415 0.4186 MNPSKLPRRKVTQANGDDSGDKLDQLLLSSAICNNEDLGSFVRKAFASGKPETLQHHLKHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVESLKSSLSDSNSKLQSVARPLLTSLDSFVEARNVSKNVNLAIDSVEACVQLMEVCSRANSYLSEDKFYMALKCVDAIERNYLDKTQSSKLKKILEKKIPEIRSYIERKVNKEFGDWLVKIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGIVAGIGDDGNSNGGGGGGLGFDLTPLYRAYHIHQTLGLEDGFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKMEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRFGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEAIGGDKFEQMYMKKEYEYSMNVLSFQIQTTDIIPAFPYVAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYDVVKKYLDKLLSEVLDESLLKLINTSVSGVSQAMQMAANMAVMERACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEETLSGLLKAKVDGFMTLIENVNWMTDDPPQDGNEYVNEVIMYLETVVSTTASQILPTQVLKRVLLDVISHISEMIVGTLVSDSVKRFSVNAITGIDTDIKLLESFAESQGTHLSDGDANQLKLALAESRQMVNLLVSNHPENFLNPVIRERSYNALDHKKVVIVSEKLKDPSDRLFGTFGSRGSRQNPKKKSLDTLIKRLRDVS* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0512 804 PIRSF Sec15 2 804 IPR007225 GO:0006886|GO:0090522
Tpr6g0512 804 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 7 804 - -
Tpr6g0512 804 Coils Coil 229 249 - -
Tpr6g0512 804 Gene3D - 417 589 IPR042045 -
Tpr6g0512 804 Coils Coil 793 804 - -
Tpr6g0512 804 Pfam Exocyst complex subunit Sec15-like 463 768 IPR046361 -
Tpr6g0512 804 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 595 743 IPR042044 -
Tpr6g0512 804 PANTHER SEC15 7 804 IPR007225 GO:0006886|GO:0090522
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0512 Tpr-Chr6 4197452 4200212 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0512 K19985 - gmx:100796432 1321.61