Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0510 ATGGAAAAAATAGAGCACACAACGGTTCACACAAACGGAATAAAAATGCACGTGGCATCAATCGGTTCAGGTCCAGTAATCCTCTTCCTCCACGGCTTCCCTGAGCTTTGGTATTCATGGCGCCACCAGCTTCTTTCCTTATCCTCTCTCGGTTATCGCGCCATCGCACCTGACCTTCGTGGTTATGGTGACACCGATGCACCTTCTTCTGCGTCTTCTTACACCCCCCTCCATATCGTCGGTGACCTCGTCGGACTTCTCGATGCTCTTGGTGTGGATCGAGTTTTTTTGGTTGGGCATGATTGGGGTGCTGCTATGGCTTGGTATTTTTGTTTGTTGAAACCTGATCGTGTTAAAGCTTTGGTTAATATGAGTGTTGTTTATCGGTCTAGAAACCCTAGTAGAAAACCTGTTCAAACTATGAGGGCTATGATTGGTGATGATTATTATATGTGCAGATTTCAGAAACCTGGGGAGGCTGAAGAAGAGTTCGCCCGTGCTGGTGCTGCCAGAATAATAAAATCATTTCTTACGCTGCGTGATTCACGTCCACTGTGTGTGCCAAAGGAGATAGGGTTTGGAGGTTCCCCTAACACTCCTATTACTTTACCTAAATGGCTGTCTGAAGAAGATGTCAATTATTATGCTACCAAATTTGAACAGAAAGGTTTTACTGGTGGGCTAAATTACTATCGCGCTCTGGACCTAACCTGGGAATTGATGGCACCATGGACCGGGGAACAGATCAAAGTACCGGTGAAGTTTATTGTGGGAGACCAGGACCTTACATATAACACACCAGGCGTTAAGGAGTATATACATAATGGTGGTTTTAAGAGACAGGTACCATACTTGCAAGAGATGGTTGTCATGGAAGGAGTAGCTCACTTTATAAATCAGGAAAGACCAGAAGAGATCAGCGCACACATATACGACTTCATCAAGAAATTTTAA 954 0.4465 MEKIEHTTVHTNGIKMHVASIGSGPVILFLHGFPELWYSWRHQLLSLSSLGYRAIAPDLRGYGDTDAPSSASSYTPLHIVGDLVGLLDALGVDRVFLVGHDWGAAMAWYFCLLKPDRVKALVNMSVVYRSRNPSRKPVQTMRAMIGDDYYMCRFQKPGEAEEEFARAGAARIIKSFLTLRDSRPLCVPKEIGFGGSPNTPITLPKWLSEEDVNYYATKFEQKGFTGGLNYYRALDLTWELMAPWTGEQIKVPVKFIVGDQDLTYNTPGVKEYIHNGGFKRQVPYLQEMVVMEGVAHFINQERPEEISAHIYDFIKKF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0510 317 PRINTS Alpha/beta hydrolase fold signature 51 66 IPR000073 -
Tpr6g0510 317 PRINTS Alpha/beta hydrolase fold signature 97 110 IPR000073 -
Tpr6g0510 317 PRINTS Alpha/beta hydrolase fold signature 111 124 IPR000073 -
Tpr6g0510 317 Pfam alpha/beta hydrolase fold 25 298 IPR000073 -
Tpr6g0510 317 PANTHER EPOXIDE HYDROLASE 1 317 - -
Tpr6g0510 317 SUPERFAMILY alpha/beta-Hydrolases 2 316 IPR029058 -
Tpr6g0510 317 Gene3D alpha/beta hydrolase 1 317 IPR029058 -
Tpr6g0510 317 PRINTS Epoxide hydrolase signature 31 49 IPR000639 GO:0003824
Tpr6g0510 317 PRINTS Epoxide hydrolase signature 51 66 IPR000639 GO:0003824
Tpr6g0510 317 PRINTS Epoxide hydrolase signature 97 110 IPR000639 GO:0003824
Tpr6g0510 317 PRINTS Epoxide hydrolase signature 111 124 IPR000639 GO:0003824
Tpr6g0510 317 PRINTS Epoxide hydrolase signature 251 267 IPR000639 GO:0003824
Tpr6g0510 317 PRINTS Epoxide hydrolase signature 291 313 IPR000639 GO:0003824
Tpr6g0510 317 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2-LIKE 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0510 Tpr-Chr6 4188903 4192206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0510 1 317 Acyl Lipid Metabolism Gene Families AT4G02340 70.978 2.28e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0510 - - gmx:100799903 556.599