Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0492 ATGGTTAACACATCTTCTTCTTCTCCGGTTAAAATAACCGTCTCCTCCGGCGCAAAAACCGGAGGAGGAAATCGAAGAAGCATCGGTCTAACAAGTCCAATTCCACGTCCTTCTGTTTCTAACAACAACCCTAACCCTAATTCCCCTCTCAGTAACATTTCAAACAGACTTTCCAGCAGCGGCGGCGCTATTCGAAGATTATCCGGTGGTGGAACTGGAGGTAACTATTCTTCCATGTCCAAAGATGATGTAACAGAAGAAACAACCTCAGAATATGTTTCTTACACTGTTCATATTCCTCCAACACCAGATCGAATGCCGCTTTCATCTTCTCAAACAAGCCTTCCTGAAGAAAATACCAAAATCAACACCAACAAGAGCTACATCTCAGGTACAATTTTCACTGGAGGTTTTAATTCAGTTACACGAGGACATGTTATGGAATGTTCGAATGATCGTGATGATTTACCGTTGAAATCTAAATTGATCTGTGCAATGAAAGGCTGTGATGAGGAAGCGATCAAGGGTTGTACATGTGAGTGTGGTTTCAAGATTTGTAGGGATTGTTACAAAGAGATTTGTGGAAATGGTGGAGGTGGTAAATGTCCTGGTTGTAAAGAATCTTACAATGTTAATAGTGATGGTGAAGAGGAGGAAGAAGAGGTTTCTGAGTGTGAAGATCAAGCTTTACCGTTACCGTCGATGGCGGAATTCAAGATGGATAAGAGACTTTCTGTTGTGAAGTCTTTTAAAGCTCAGAATCATCCACCTGATTTTGATCATACTCGTTGGTTATTTGAAACTAAAGGAACTTATGGTTATGGAAATGCTGTTTGGCCTAAAGATGGTTTTGGTTCTAATGGTTATGAACCCCCTCCTGATTTTGGAAGGAAAAGTAGAAGACCTTTGACAAGAAAAGTTGGGGTTTCTGCTGCAATTCTCAGTCCTTATAGGTTGCTTATTCTGCTGCGTCTAGCTGCACTTGGTATGTTTCTTACATGGAGGGTTCGACACCGGAACCATGAGGCAATGTGGTTGTGGGGAATGTCAGTAACTTGTGAGCTATGGTTTGCATTTTCATGGATTCTTGATCAGCTGCCAAAGTTGTGTCCTGTCAACAGAGTTACTGATTTGTCTGTTTTGAAAGAAAGGTTTGAGTCGCCGCATCTGCGGAACCCGAAAGGAAGGTCTGATCTACCTGGAATAGATATCTTTGTTTCAACTGCAGATCCAGAAAAGGAGCCTCCTCTTGTAACTGCAAACACCATTTTGTCAATTCTTGCAGTTGATTATCCAGTGGAAAAAGTTGCTTGTTATTTGTCTGATGATGGTGGAGCTCTTTTGACATTTGAAGCTCTTGCTGAGACTGCTAGTTTTGCAAGAGTGTGGGTTCCTTTCTGTAGAAAACACAAAATTGAGCCAAGAAATCCTGAAGCATATTTCGGTCAGAAGCGCGATTTTCTCAAGAACAAGGTTCGGTTGGACTTTGTTAGGGAGAGAAGAAGGGTGAAGAGAGAGTATGATGAATTCAAAGTGAGGATTAATTCCTTACCTGAATCTATAAGGAGAAGATCAGATGCTTACAATGCTCATGAGGAGTTACGAGCCAAGAAGAAACAGATGGAAACCGGTGCTGATATATCTGAACTCCTTAAGGTTCCTAAAGCAACTTGGATGTCTGATGGTTCTCACTGGCCTGGAACTTGGTCTTCAGCAGAACCTGACCACTCTAGAGGTGACCATGCTGGTATTATTCAGGCACTGTTGGCTCCACCGAATGTAGAACCAGAATATGGTTCAGAAGCTGATGGGGAGAATTTGATTGACACAACAGATGTCGATGTTAGGTTGCCAATGCTTGTTTATGTATCACGTGAGAAGAGACCAGGATATGATCACAACAAGAAAGCGGGCGCCATGAATGCTCTTGTTCGAACTAGTGCCATAATGTCTAATGGACCATTCATTCTCAATCTTGACTGTGATCATTATGTCTACAACTCCTTGGCCTTAAGGGAAGGTATGTGCTTTATGCTTGACAGAGGAGGTGACCGGATATGTTATGTTCAATTCCCTCAAAGGTTTGAAGGTATTGACCCGAGTGATCGATATGCAAATCACAACACAGTGTTCTTTGATGTGAGCATGAGAGCTCTTGATGGTTTACAAGGTCCAATGTATGTTGGAACTGGCTGCATTTTCAGAAGAACAGCTCTTTATGGTTTTAGTCCTCCTAGAGCTTCTGAACATCATGGATGGTTTGGTAGGAGGAAAATTAAGTTGTTTCTGAGAAAACCAAAGGTGTCAAAAAAGGAAGAAGATGAAGTTTGTGTGCCAATAAATTGCGATCACAACGACGACGATGCAGATATTGAGTCCTTGCTTCTTCCCAAAAGGTTTGGGAACTCTACTACTCTAGCTGAATCCATTCCAGTTGCGGAATACCAGGGAAGGTTGCTTCAAGATTCAAATGGAAATGTAACACAAGGAAGGCCTCCTGGTTCTCTCACCAAACCTCGTGAAACTTTAGATGCTGCCACCGTTGCCGAGGCAATCAGTGTCATATCTTGTTACTATGAGGATAGAACTGAGTGGGGGAAACGAGTCGGGTGGATATATGGTTCAGTTACAGAAGATGTTGTGACCGGTTACAGAATGCACAATAGAGGATGGAGATCAGTGTACTGTGTTACCAAAAGAGATGCTTTTAGAGGAACAGCTCCAATCAATTTAACAGACAGGCTACACCAGGTGCTTCGTTGGGCGACAGGGTCGGTCGAAATCTTCTTCTCAAGGAACAACGCTTTATTGGCAAGTCCTAGAATGAAATTTTTGCAAAGGGTAGCATATTTCAATGTTGGAATGTACCCTTTCACTTCAATGTTTCTGATTGTGTATTGCTTTCTACCTGCATTGTCCTTATTCTCAGGACAGTTTATAGTCCAATCTCTCAGTGTAACCTTTCTAGTGTTCTTGCTTGCAATCACAGTCACACTATGCATGCTTGCACTACTTGAGATCAAGTGGTCAGGTATCACTTTACATGATTGGTGGAGAAATGAACAGTTTTGGTTAATCGGCGGAACAAGTGCACATCCTGCAGCTGTTTTACAAGGCTTGTTGAAGGTAATAGCAGGAGTTGATATCTCATTCACACTTACATCAAAGTCAGCTACACCAGAAGATGGAGAAGATGAATTTGCTGATCTTTATGTGGTGAAATGGAGCTTTCTAATGGTTCCACCAATCACAATCATGATGGTGAATACTATTGCTATTGCTGTTGGAGTAGCTAGGACTTTATATAGTCCATTTCCACAATGGAGTAGACTAGTTGGAGGGTTGTTTTTCAGCTTCTGGGTGTTATGTCATCTTTACCCTTTTGCAAAAGGACTTATGGGAAGAAGAGGAAAGGTTCCAACCATTATCTATGTTTGGTCTGGATTACTCTCAATCATTATTTCAATGCTTTGGGTTTATATTAACCCTCCTGCTGGTGGAAGACCACAAGATTACTCTCAATTTCGGTTTCCTTAG 3537 0.4182 MVNTSSSSPVKITVSSGAKTGGGNRRSIGLTSPIPRPSVSNNNPNPNSPLSNISNRLSSSGGAIRRLSGGGTGGNYSSMSKDDVTEETTSEYVSYTVHIPPTPDRMPLSSSQTSLPEENTKINTNKSYISGTIFTGGFNSVTRGHVMECSNDRDDLPLKSKLICAMKGCDEEAIKGCTCECGFKICRDCYKEICGNGGGGKCPGCKESYNVNSDGEEEEEEVSECEDQALPLPSMAEFKMDKRLSVVKSFKAQNHPPDFDHTRWLFETKGTYGYGNAVWPKDGFGSNGYEPPPDFGRKSRRPLTRKVGVSAAILSPYRLLILLRLAALGMFLTWRVRHRNHEAMWLWGMSVTCELWFAFSWILDQLPKLCPVNRVTDLSVLKERFESPHLRNPKGRSDLPGIDIFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARVWVPFCRKHKIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMETGADISELLKVPKATWMSDGSHWPGTWSSAEPDHSRGDHAGIIQALLAPPNVEPEYGSEADGENLIDTTDVDVRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYVYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRASEHHGWFGRRKIKLFLRKPKVSKKEEDEVCVPINCDHNDDDADIESLLLPKRFGNSTTLAESIPVAEYQGRLLQDSNGNVTQGRPPGSLTKPRETLDAATVAEAISVISCYYEDRTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRVAYFNVGMYPFTSMFLIVYCFLPALSLFSGQFIVQSLSVTFLVFLLAITVTLCMLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGEDEFADLYVVKWSFLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGLFFSFWVLCHLYPFAKGLMGRRGKVPTIIYVWSGLLSIIISMLWVYINPPAGGRPQDYSQFRFP* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0492 1178 MobiDBLite consensus disorder prediction 1 62 - -
Tpr6g0492 1178 SUPERFAMILY RING/U-box 158 213 - -
Tpr6g0492 1178 MobiDBLite consensus disorder prediction 71 96 - -
Tpr6g0492 1178 Pfam RING/Ubox like zinc-binding domain 164 210 - -
Tpr6g0492 1178 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 116 1168 - -
Tpr6g0492 1178 MobiDBLite consensus disorder prediction 1 118 - -
Tpr6g0492 1178 Pfam Cellulose synthase 402 1165 IPR005150 GO:0016020|GO:0016760|GO:0030244
Tpr6g0492 1178 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 607 755 IPR029044 -
Tpr6g0492 1178 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 116 1168 - -
Tpr6g0492 1178 SUPERFAMILY Nucleotide-diphospho-sugar transferases 417 970 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0492 Tpr-Chr6 4051533 4056658 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0492 74 1178 Glycosyltransferase AT3G03050 67.496 0.0 1539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0492 K00770 - gmx:100804687 1983.38