Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0491 ATGTTGTGGATTATGAAATTTTCACAGATTTTCTCCGCCGCAATGTTGGTAATCATTCTCTCCCCCTCTCTCCAATCTTCATACTACCCTGCAGAAGCAATTCGATCTTCTTATTCATATCTTCAAATCCCTAACGATTACCGATTTTCTTTTCGTAAATCACCTTCTTTCCACAATGCCGAAGAATGCGATTCGATTTCAACAGATATCAGTGTATGCGATCCTAGTTTGGTTCATGTTGCTATAACCCTAGATATTGATTATCTTCGTGGTTCAATCGCAGCCGTTCATTCCATTCTACGACATGCCTTTTGTCCTCAGAGTATTTTCTTTCATTTTCTTGTTACTGATACCAATCTTGAAGATTTGGTTCAATCCACTTTTCCTGAGTTGAAATTCAAGGTTTATTACTTCGATTCTAATATTGTTAAGAATTTGATTTCAACTTCTGTCAGACAAGCTTTGGAGCAACCGTTGAATTATGCGAGAAATTATCTTGCGGATCTGTTAGAGAGTTGTGTTCAGAGAGTGATTTACTTGGATTCAGATCTTGTTGTTGTTGATGATGTAGCGAAACTATGGAGTACAGATTTAGGTTTAAAAACGATCGGAGCACCGGAATATTGTCACGCGAATTTCACTAAGTATTTCACGGCGAGGTTTTGGTCGGAGCCGTCGTTTGCGGCGACGTTTGAGAAACGGAAGGTTTGTTACTTTAATACTGGTGTTATGGTTATGGATCTGGTACGGTGGAGAAAAGAAGGGTACACGAAGAAGATTGAAAAATGGATGGAGATACAGAAAAGTGAAAGGATCTATGAACTTGGTTCATTGCCACCGTATTTGTTAGTATTCGCCGGACACGTGGCGGGGATCGAACACCGGTGGAATCAACATGGTTTGGGTGGTGATAATGTGAAGGGTAGTTGTAGAGATTTGCATGCTGGTCCGGTGAGTTTGTTACATTGGTCAGGTAGTGGGAAGCCATGGTTAAGACTTGATTCAAGAAATCCTTGTCCTCTTGATGCACTTTGGGCACCGTTTGATTTGTATGGACATGGAAATAGCTATGAATCATTATAG 1083 0.4026 MLWIMKFSQIFSAAMLVIILSPSLQSSYYPAEAIRSSYSYLQIPNDYRFSFRKSPSFHNAEECDSISTDISVCDPSLVHVAITLDIDYLRGSIAAVHSILRHAFCPQSIFFHFLVTDTNLEDLVQSTFPELKFKVYYFDSNIVKNLISTSVRQALEQPLNYARNYLADLLESCVQRVIYLDSDLVVVDDVAKLWSTDLGLKTIGAPEYCHANFTKYFTARFWSEPSFAATFEKRKVCYFNTGVMVMDLVRWRKEGYTKKIEKWMEIQKSERIYELGSLPPYLLVFAGHVAGIEHRWNQHGLGGDNVKGSCRDLHAGPVSLLHWSGSGKPWLRLDSRNPCPLDALWAPFDLYGHGNSYESL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0491 360 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 79 338 IPR029044 -
Tpr6g0491 360 PANTHER HEXOSYLTRANSFERASE 7 354 - -
Tpr6g0491 360 SUPERFAMILY Nucleotide-diphospho-sugar transferases 78 354 IPR029044 -
Tpr6g0491 360 Pfam Glycosyl transferase family 8 79 332 IPR002495 GO:0016757
Tpr6g0491 360 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 7 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0491 Tpr-Chr6 4042437 4044589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0491 1 353 Glycosyltransferase AT3G62660 75.766 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0491 - - cit:102622159 574.704