Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0450 ATGGCTCCTCCCAATGAACCAGTGAATTCTAGAACCCTTGATCTCATCAAAACAGATTCTTTATTTGATTTATGTGAAGGAAAATTTACTGTGAAAGGTGTTCCTTTGTTGCATGATGTTCCTGAAAATGTGTTTTTCAGTTCTTTTTCTTCTATTTGCAAACCCTCTGAATCTAATGCACCACCTTCACTCCTTAAAAAAATTCTTGCTTTTTCTCACAAAGGTGGTTTCTTTGGATTCAACCATGAAACCCCATCTGATAGATTGATGAATTCATTGGGTAGTTTCAATGGAAAAGACTTTGTGAGTATTTTCAGGTTCAAAACATGGTGGTCTACTCAATGGGTTGGAAAATCTGGTTCTGATTTACAAATGGAAACTCAATGGATTCTTTTAGAAATCCCTGAAATCAAATCATATGTTGTAATCATTCCAATAATTGAAAAAGGATTTAGATCAGCACTTTTTCCTGGTTCTAATGACCATTTTATGATTTGTGCTGAAAGTGGTTCAACAAAGGTGAAAGAATCAAGTTTCAATTCAATTGCTTATGTTCATTTTAATGAAAATCCTTATGATTTGATGAAAGAAGCTTATAGTGTTTTAAGGGTTCATCTCAACACTTTTAAGCTATTGGAAGAGAAAACAATCCCAAATTTAGCCGATAAATTTGGTTGGTGCACTTGGGATGCTTTCTATTTAACTGTTAATCCTGTTGGTGTTTTTCATGGTCTTGATGATTTTACAAAAGGCGGTGTCGAACCAAGGTTTGTTATCATTGATGATGGATGGCAAAGTATTAGTATAGATGGTGCTAATCCTAATGAAGATGCTAAGAATCTTGTTCTTGGTGGTGAACAAATGACTGCAAGACTTTATAGGTTTGATGAATGTGACAAGTTCAAGAAATATGAAAGTGGTTTGTTATTAGGTCCTAATTCACCTCCTTTTAATCCAAAAACTATCAAGGAGTTGATTACAAAGGGAATTGAACATGAACATTTAGGTAAGCAAAGAGATAAAGCTATTCTATCTAAAAGTTCTGATTTGGCTGAGATTGAGTCAAAAATCAAGAAAGTAATAAAAGAAATTGATGATCTCTTTGGTGGAGATCAAAGTAGTACTAGTAGTGTTCCAAAAAGTGAATGTGGAAGCTTGTGTTGCAAGAAAAAGGAGTATGGATTGAAGGCTTTCACAAAAGATTTGAGGACTAAGTTCAAAGGTTTAGATGATGTTTATGTTTGGCATGCACTTTGTGGTGCTTGGGGAGGTGTAAGGCCAGGAACTACACATCTTAATACCAAAATTGTCCCTTGCAAACTTTCTCCTGGTCTTGATGGGACAATGGTGGATCTTGCTGTGGTGAAACTTGTTGAAGGTTCAATTGGGCTAGTTGATCCTAATCAAGCCAATGATTTTTATGACTCCATGCACTCTTATCTTGCTGAATCTGGTGTCACAGGAGTCAAAGTTGATGCCATTCATTGTCTTGAATATGTGTGTAGTGAACATGGAGGCAGAGTTGACCTTGCCAAAGCTTACTATGAAGGGTTGACAAAATCCATTGCCAAGAATTTTAATGGAAATGGAATCATTGCTAGCATGCAACAGTGCAATGACTTTTTCTTCCTTGGAACAAACCAAGTTTCTATGGCAAGAGTTGGGGATGATTTTTGGTTCCAAGATCCTAATGGTGACCCAATGGGAGCATTTTGGTTACAAGGTGTACACATGATTCATTGTTCCTACAATAGCTTATGGATGGGGAATATGATTCAGCCAGATTGGGACATGTTCCTATCAGACCATATTTGTGCTAAATTTCATGCTGGTTCAAGAGCTATTTGTGGTGGTCCAATTTATTTGAGTGATAGTGTTGGTTCTCATGACTTTGATTTGATTAAGAAACTTGTGTTCCCTGATGGTACAATCCCAAAGTGCATACATTTTCCTCTTCCAACTAGAGATTGTCTTTTCAAAAACCCTCTTTTTGACCAAACAACTGTTCTCAAAATTTGGAACTTCAACAAGTATGGAGGTGTGATTGGTGCTTTCAACTGTCAAGGGGCAGGATGGGATCCAAAAGAGCACAAATTTAGGGGCTTCCCTGAATGCTACAAGCCAATAACTGGAACTGTGCATGTAACTGAAGTTGAATGGAATCAGAAGAAAGAAGCATCTGATTTGGGCAAGGCAGAAGAATATGTAGTCTACTTCAATCAAGCTGAAGAACTTTCTTTCATGACTCAAAAATCTGAACCAATTCAATTTACAATTCAACCATCCACATTTGAGTTATATAGTTTTATTCCTGTCACAAAGCTAGGTGGCAGCATCAAATTTGCACCAATTGGGTTGACTAACATGTTCAATAGTGGTGGAACAATTCTTGGTTTGGAATATGTTGAAAGTGGTGCTAAGATTAAGGTTAAAGGTGGTGGAAATTTTCTTGCTTATTCAAGTGAATCACCAAAGAAGTTTCAATTGAATGGTTCTGATGTGGATTTTAAGTGGCTGAGTGATGGAAAATTGTCTCTCAATCTTCCTTGGATTGAAGAGGCTTGTGGGGTTTCTGATTTGTCAATTTTGTTCTAG 2595 0.3669 MAPPNEPVNSRTLDLIKTDSLFDLCEGKFTVKGVPLLHDVPENVFFSSFSSICKPSESNAPPSLLKKILAFSHKGGFFGFNHETPSDRLMNSLGSFNGKDFVSIFRFKTWWSTQWVGKSGSDLQMETQWILLEIPEIKSYVVIIPIIEKGFRSALFPGSNDHFMICAESGSTKVKESSFNSIAYVHFNENPYDLMKEAYSVLRVHLNTFKLLEEKTIPNLADKFGWCTWDAFYLTVNPVGVFHGLDDFTKGGVEPRFVIIDDGWQSISIDGANPNEDAKNLVLGGEQMTARLYRFDECDKFKKYESGLLLGPNSPPFNPKTIKELITKGIEHEHLGKQRDKAILSKSSDLAEIESKIKKVIKEIDDLFGGDQSSTSSVPKSECGSLCCKKKEYGLKAFTKDLRTKFKGLDDVYVWHALCGAWGGVRPGTTHLNTKIVPCKLSPGLDGTMVDLAVVKLVEGSIGLVDPNQANDFYDSMHSYLAESGVTGVKVDAIHCLEYVCSEHGGRVDLAKAYYEGLTKSIAKNFNGNGIIASMQQCNDFFFLGTNQVSMARVGDDFWFQDPNGDPMGAFWLQGVHMIHCSYNSLWMGNMIQPDWDMFLSDHICAKFHAGSRAICGGPIYLSDSVGSHDFDLIKKLVFPDGTIPKCIHFPLPTRDCLFKNPLFDQTTVLKIWNFNKYGGVIGAFNCQGAGWDPKEHKFRGFPECYKPITGTVHVTEVEWNQKKEASDLGKAEEYVVYFNQAEELSFMTQKSEPIQFTIQPSTFELYSFIPVTKLGGSIKFAPIGLTNMFNSGGTILGLEYVESGAKIKVKGGGNFLAYSSESPKKFQLNGSDVDFKWLSDGKLSLNLPWIEEACGVSDLSILF* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0450 864 PANTHER - 1 864 IPR008811 -
Tpr6g0450 864 SUPERFAMILY (Trans)glycosidases 222 637 IPR017853 -
Tpr6g0450 864 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 4-RELATED 1 864 - -
Tpr6g0450 864 Pfam Raffinose synthase or seed imbibition protein Sip1 24 847 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0450 Tpr-Chr6 3685400 3690101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0450 1 864 Glycoside Hydrolase AT4G01970 56.821 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0450 K06611 - gmx:100815922 1424.07