Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0447 ATGGCGAATATTCCCGATCCAGATATCGACGACGATTTTAGCGACATTTACAAAGAGTACACTGGTCCTCCAGGATCTGGATCTACTCTAGAGAGAGCAAAATCAAACAAAAGGTCAAATGCAGGTTCTGATGAAGAAGATGAAGTTCGTGATCCTAATGCTATTCCAACTGGTTTCATCAGCCGTGATGCTAAGGTTTGGGAAGCTAAATCCAAAGCTACTGAGAGAAATTGGAAGAAAAGAAAAGAAGAAGAAATGATCTGTAAACTCTGTGGTGAATCAGGGCATTTCACTCAGGGTTGCCCATCTACCCTTGGGGCAAACAATAAGTCTCAAGAATTATTTCAAAGGATACCCGCAAGAGACAAAAATGTAAGAGCACTTTTCACAGAGAAAGTTATAAGTAAAATTGAAAGGGATATTGGCTGCAAAATTAAGATGGACGAGAAATTCATTATTGTCAGCGGTAAGGATAGGTTAGTTTTATCTAAAGGTGTTGATGCTGTGCATAAGATTAGAGAGGAAGGTGAACAAAAAGGATCTTCCAGTTCTCACATGAATCGATCAAGGTCACCACCATCTCACCGATCAAGGTCACCACCACCTCAGAGAAGTCCTGTTAATGCCCGGTTTCAGCGCTCTGAGCCCCAGAGATCTCATTCTGCACCACGGAATACCCCTCCGTTTCCACAAAGGTTTGGTAGGCAAGAGAGAGCTGTTGATGATCGTGTTCGCGAGGACACTCAAAAGTTTGCAAGAGATTCTCCACAAGCTTATGGGAATAGTGCGCCTAGAGGTCGTTCAAGCCAGTCAAGATCTCCAAGACAGGCTCCACATTCAGGGAACTCTTATAATTCATTTGATGGCCGAAGTCAAAACATGAGTACTTACAAGAATGATGGGTGGGATTCTCACAGGAGAGAATCTGGTATCCAACCCGGTCAGCAGTTTGATCACAATGCCCCACCTCAGTCTCTAGAAGAATTAGAATTAGAGTATAAAAAGGAGGCAATGGAGCTAATGAAAATTCGTGACAGAGAAGAAGATGAAGAAAATTTCCAGCATCGTGAGGCTATTCGAGATATGAGGGAGAAGTACATGAACAAAGTTGCTTTGTTGAGTGCCACACATGCAAAACAATGGGAAGACTTTTGTCAGCTTGATGCTCAGAGACGTCAACAACATTCCATCCAGCAAATGTCTCCTGGATATCGGGGTTATAAGCAGCAGAATTTTGCTGACTATGATAGGTCTCCTGTCAATCCTCCCTTTGTTGGAACCAATTTACCTTTGGAATCAAGGAATAGGTTCTCAAACAGTATGGAGCCTTATCCTACAAGGCCTCATGATAATTTTGGTGAATTTCAGAGGCGTGGAGATTTCGCAAAAGCTTACAACCGATATTAA 1407 0.425 MANIPDPDIDDDFSDIYKEYTGPPGSGSTLERAKSNKRSNAGSDEEDEVRDPNAIPTGFISRDAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANNKSQELFQRIPARDKNVRALFTEKVISKIERDIGCKIKMDEKFIIVSGKDRLVLSKGVDAVHKIREEGEQKGSSSSHMNRSRSPPSHRSRSPPPQRSPVNARFQRSEPQRSHSAPRNTPPFPQRFGRQERAVDDRVREDTQKFARDSPQAYGNSAPRGRSSQSRSPRQAPHSGNSYNSFDGRSQNMSTYKNDGWDSHRRESGIQPGQQFDHNAPPQSLEELELEYKKEAMELMKIRDREEDEENFQHREAIRDMREKYMNKVALLSATHAKQWEDFCQLDAQRRQQHSIQQMSPGYRGYKQQNFADYDRSPVNPPFVGTNLPLESRNRFSNSMEPYPTRPHDNFGEFQRRGDFAKAYNRY* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0447 468 MobiDBLite consensus disorder prediction 1 56 - -
Tpr6g0447 468 MobiDBLite consensus disorder prediction 261 292 - -
Tpr6g0447 468 MobiDBLite consensus disorder prediction 235 252 - -
Tpr6g0447 468 PANTHER OS01G0252900 PROTEIN 1 468 - -
Tpr6g0447 468 SUPERFAMILY Retrovirus zinc finger-like domains 75 109 IPR036875 GO:0003676|GO:0008270
Tpr6g0447 468 MobiDBLite consensus disorder prediction 173 292 - -
Tpr6g0447 468 PANTHER OS01G0252900 PROTEIN 1 468 - -
Tpr6g0447 468 MobiDBLite consensus disorder prediction 37 52 - -
Tpr6g0447 468 ProSiteProfiles Zinc finger CCHC-type profile. 88 103 IPR001878 GO:0003676|GO:0008270
Tpr6g0447 468 MobiDBLite consensus disorder prediction 201 226 - -
Tpr6g0447 468 Coils Coil 326 346 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0447 - - gmx:100806099 714.916