Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0444 ATGGCGACTCTAACTCAAATTTGTTCGTTAACAATAAGAACCAAATTGAATTTCAGTTGCCAACAAAAACTACACAATCACCACCACACGAACAATCTCAATTTCACCAATCCAAAGCATAGCAGTAAAATTTCAACCACGGTAATCCGTTTAGTCTCTGCCGCTAGCCAGAACCAATCTTCGCCGGGATTATACTCCGCCAAGCAATTCGACCTAACCGCTTCTAACGTCAATCTCGTTCTTGAAGATGTTCGTCCTTACCTCATCTCTGACGGAGGAAACGTCGACGTTGTGTCGGTTGAAAACGGCGTCGTTTCTCTTAAGCTACAAGGAGCTTGCGAAAGTTGTCCTAGCTCAACCACGACGATGAAAATGGGAATCGAACGTGTTCTTAAGGAAAAATTTGGTGATTCTATTAAAGATATTGTTCAAGTTTTTGATGATGATCAAGCAAGAGAAACTACCGTTGAGGCGGTGAATAATCATCTAGAGATATTGAGGCCGGCGATTAAGAATTACGGAGGTAGCGTGGAAGTGTTATCTGTTGAAGGTGGTGATTGTGTTGTGGCGTATGTCGGACCTGAATCAATTGGATCAGGTGTGAAAGCTGCAATCAAAGAGAAGTTTCCGGATATTCTCAATGTTACATTCTCCACCTAG 660 0.4242 MATLTQICSLTIRTKLNFSCQQKLHNHHHTNNLNFTNPKHSSKISTTVIRLVSAASQNQSSPGLYSAKQFDLTASNVNLVLEDVRPYLISDGGNVDVVSVENGVVSLKLQGACESCPSSTTTMKMGIERVLKEKFGDSIKDIVQVFDDDQARETTVEAVNNHLEILRPAIKNYGGSVEVLSVEGGDCVVAYVGPESIGSGVKAAIKEKFPDILNVTFST* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0444 219 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 153 216 IPR034904 -
Tpr6g0444 219 Gene3D - 155 217 IPR034904 -
Tpr6g0444 219 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 75 146 IPR034904 -
Tpr6g0444 219 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 20 218 - -
Tpr6g0444 219 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 20 218 - -
Tpr6g0444 219 Gene3D - 69 154 IPR034904 -
Tpr6g0444 219 Pfam NifU-like domain 78 138 IPR001075 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0444 Tpr-Chr6 3594348 3596055 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0444 K22074 - gmx:100527356 256.144