Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0441 ATGGATGCAAAAGATATACTTGGATTGCACAAAACCTCATTCCCATCTTCAATTGAGAAAAAATCTCGACCTCCCAAAGAGTCTCAGAGAAAACCTGATGGCATTTCACGCGAGGTTTATGCACTTACCGGTGGAATGCCACCACTTATGCCTTCAATTGATGCTTTTCAATTGAAAAAGAAGCATAACGAAAAGGTTACTTGGCAATGGCTTCCTTTCACTAATTCTGCTCGTAAAGACGATCTTCATCTTTACCATTGGGTTCGAATAGTCAATGGTGTTCTACCTACTGGGGACTATTCTTTTGCCAAGTATAATAAGTCTGTTGACATTATCAAATACACAGCCGAGGAGTACGAAAAGTATTTGACAGATCCTATGTGGACCAAGGAGGAGACAGATGAACTATTCGACTTGTGTGAGAGGTTCGATCTCCGTTTTGTTGTAATAGCTGATAGATTCTCATCATCTCGGACTGTAGAGGAGTTAAAGGATCGATATTATAGTGTGTTGCGTGCTATAGTACTTGCTAGAGCTGCATCTTCTGGAGATGTTGCAACACATCCTCTCATTAAGGTGAAGTCAAATTTTAATGAGCCATATAATGTTTCACAAGAAATAGAGCGAAAACGGGCATTATCCATGGTCCTCTCACAAACAAGACAACACGAGAAAAGAGATGAAGAGGTGCTTATTGAAGCAAAAAGAATAGCCGAGTTACGGATGGCTTCTAAGGTTGCTGAACAGTCTCAATTGGTTGTTGCTACAAATGCTGATGCAGAAGTTACAGAGAGGGCTATCCCCGGTGAATCTCCATCTCCATCGAATGTGCAACATCCACCAATGGCTGTGCCTTCCCCAATTACAGATAATGCTTCTACTCTAGCGTCTCTTCGCATGCTTCGTGTATATTTGAGGACATATGCACTTGAGCAAATGGTGCAAGTTTCAAACTCAACTGCTGGAGTTCGTACTATCAAACGGGTTGAGCAAACATTGCAAGATCTTGGGATCAATTTGAAACCAAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTGGAACTAAGAAGAGAAATACTAACTTGGCTGAATCTCCAGAAACAGGTGCAATATAAAGAGGCCGAAGGTTCATCTTATCGTGATGGGACCTACGGTGAAACACCAGACACACCAAAGGATCGTACATTTATTCCCGACTCGTTGAATTTTGGAGTTTCAGGCGAAAGGGTTGGCAAAAAGGACCAAAAACGCAAGGGGCATGGAGCTCAACCTACAGCGGCTCATAAAAGACCTAGAAAACAAAAGGCCTCGGATCTTTAA 1323 0.4218 MDAKDILGLHKTSFPSSIEKKSRPPKESQRKPDGISREVYALTGGMPPLMPSIDAFQLKKKHNEKVTWQWLPFTNSARKDDLHLYHWVRIVNGVLPTGDYSFAKYNKSVDIIKYTAEEYEKYLTDPMWTKEETDELFDLCERFDLRFVVIADRFSSSRTVEELKDRYYSVLRAIVLARAASSGDVATHPLIKVKSNFNEPYNVSQEIERKRALSMVLSQTRQHEKRDEEVLIEAKRIAELRMASKVAEQSQLVVATNADAEVTERAIPGESPSPSNVQHPPMAVPSPITDNASTLASLRMLRVYLRTYALEQMVQVSNSTAGVRTIKRVEQTLQDLGINLKPRVPTKAVCAEHLELRREILTWLNLQKQVQYKEAEGSSYRDGTYGETPDTPKDRTFIPDSLNFGVSGERVGKKDQKRKGHGAQPTAAHKRPRKQKASDL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0441 440 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 440 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Tpr6g0441 440 SUPERFAMILY Homeodomain-like 124 176 IPR009057 -
Tpr6g0441 440 ProSiteProfiles Myb-like domain profile. 128 171 IPR001005 -
Tpr6g0441 440 Gene3D - 97 184 - -
Tpr6g0441 440 Pfam SANT/Myb-like domain of DAMP1 100 174 IPR032563 -
Tpr6g0441 440 SMART sant 124 173 IPR001005 -
Tpr6g0441 440 MobiDBLite consensus disorder prediction 375 440 - -
Tpr6g0441 440 PANTHER BNAA04G26950D PROTEIN 2 440 - -
Tpr6g0441 440 CDD SANT_DMAP1_like 128 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0441 Tpr-Chr6 3582195 3587687 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0441 K11324 - gmx:100818926 678.707