Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0439 ATGGCACCGGAGCTTATTCCAACCGCTACAAAATCAGTTACAGGTTTCACGAAATCCGTTACGATACCGAAACGTGCTTACGTAACGTTTCTTGCTGGTAACGGTGATTATGTGAAAGGTGTAATTGGTTTGGCGAAAGGTTTGAGGAAGGTGAAGACGGTGTATCCGCTTGTTGTGGCGGTGCTTCCAGATGTACCGGAGGAACACCGTGAGATGTTGGAATCTCAGGGATGTATTGTTCGTGAGATTGAACCGGTTTACCCACCCGAAAATCAGACTCAGTTTGCTATGGCTTATTACGTCATCAATTATTCAAAGCTTCGTATATGGGAGTTCTTGGAATATAGCAAGATGATATACTTGGACGGAGACATTCAAGTTTATGATAACATTGATCATCTCTTTGATCTACCAGATGGTTATTTCTATGGTGTGATGGATTGTTTCTGTGAAAAAACATGGAGTCACACACCACAGTACAAAATTGGGTATTGTCAACAGTGTCCACAGAAAGTACAATGGCCAAAACAAATGGGTCAACCCCCTTCACTTTATTTCAATGCTGGCATGTTCTTGTTTGAGCCTAGCATAGAAACTTACCACGATCTTTTGAATACACTTCAAGTCACTCCTCCAACACCATTTGCAGAACAAGATTTCTTAAACATGTATTTCAAAGATATTTATAAGCCAATTCCTTTGGTTTATAATCTTGTTCTTGCTATGTTGTGGCGTCACCCTGAGAATGTCGATATTCATAATGTCAAGGTTGTTCACTATTGTGCAGCGGGATCAAAGCCTTGGAGGTATACAGGGAAGGAAGATAATATGCAGAGGGAGGATATAAAAATGTTGGTAAAGAAATGGTGGGATGTTTACAACGATTCTTCACTTGACTACAATAAGAATTTGAGTGGAAATAGTGAAGCACACACGAATGGTGTTGAAAATGAGCCATTCGTACAAGCGTTATCAGAGGTTGGTCGTGTTCAATATGTCACAGCACCTTCAGCAGCTTAA 1020 0.4059 MAPELIPTATKSVTGFTKSVTIPKRAYVTFLAGNGDYVKGVIGLAKGLRKVKTVYPLVVAVLPDVPEEHREMLESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFLEYSKMIYLDGDIQVYDNIDHLFDLPDGYFYGVMDCFCEKTWSHTPQYKIGYCQQCPQKVQWPKQMGQPPSLYFNAGMFLFEPSIETYHDLLNTLQVTPPTPFAEQDFLNMYFKDIYKPIPLVYNLVLAMLWRHPENVDIHNVKVVHYCAAGSKPWRYTGKEDNMQREDIKMLVKKWWDVYNDSSLDYNKNLSGNSEAHTNGVENEPFVQALSEVGRVQYVTAPSAA* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0439 339 PANTHER GALACTINOL SYNTHASE 1 1 339 - -
Tpr6g0439 339 CDD GT8_Glycogenin 25 296 - -
Tpr6g0439 339 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Tpr6g0439 339 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 339 - -
Tpr6g0439 339 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 298 IPR029044 -
Tpr6g0439 339 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 302 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0439 Tpr-Chr6 3558727 3561490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0439 1 339 Glycosyltransferase AT1G56600 72.647 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0439 K18819 - gmx:100809287 610.142