Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0436 ATGGCTTTGATCACCAGTACCAACCTTGCGAGTTTTCAGCTCAAAGAAACTGAAATTCCTTTCTCACGTTTCACCTTCACTCAAAAGCATTTTGGATATCGTCCTCATCACAACAATGTGGTCTTAAGAAACAACGGAAGAAATGAAGCAATTCTTCCTAAAGTCAGAGCTCAGAATCTTCCTGATTATGTTCCAGAATCCAAGTTTTACAAAATTGAAGCCATTCTCAGACCCTGGAGAATTCCTCAGGTTTCTTCGGCTTTGTTGAAGATGGGAATTCGTGGTGTCACTGTATCTGATGTCAAAGGATTTGGTGCTCAGGGCGGTTCCAAAGAAAGGCAGGGAGGCTCTGAATTTTCTGAAGACAGTTTTGTTGCCAAAGTTAAAATGGAAATAGTGGTGAGGAAAGACCAGGTTGAGGCAGTAATATCCAAAATCACGGAGGTGGCAAGGACCGGGGAGATCGGTGATGGCAAAATTTTCTTGATCCCTGTATCTGATGTAATAAGAATTCGCACAGGTGAACGCGGGGAGCAGGCTGAGAGGATGGCTGGGGGATTAACTGATTTGTCATCTGTTTGA 582 0.4347 MALITSTNLASFQLKETEIPFSRFTFTQKHFGYRPHHNNVVLRNNGRNEAILPKVRAQNLPDYVPESKFYKIEAILRPWRIPQVSSALLKMGIRGVTVSDVKGFGAQGGSKERQGGSEFSEDSFVAKVKMEIVVRKDQVEAVISKITEVARTGEIGDGKIFLIPVSDVIRIRTGERGEQAERMAGGLTDLSSV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0436 193 PANTHER NITROGEN REGULATORY PROTEIN P-II 35 190 IPR002187 GO:0006808|GO:0030234
Tpr6g0436 193 Gene3D - 57 191 IPR015867 -
Tpr6g0436 193 PANTHER NITROGEN REGULATORY PROTEIN P-II HOMOLOG 35 190 - -
Tpr6g0436 193 ProSiteProfiles P-II protein family profile. 69 181 IPR002187 GO:0006808|GO:0030234
Tpr6g0436 193 SUPERFAMILY GlnB-like 70 180 IPR011322 -
Tpr6g0436 193 PRINTS P-II protein signature 70 85 IPR002187 GO:0006808|GO:0030234
Tpr6g0436 193 PRINTS P-II protein signature 91 109 IPR002187 GO:0006808|GO:0030234
Tpr6g0436 193 PRINTS P-II protein signature 121 144 IPR002187 GO:0006808|GO:0030234
Tpr6g0436 193 PRINTS P-II protein signature 152 172 IPR002187 GO:0006808|GO:0030234
Tpr6g0436 193 Pfam Nitrogen regulatory protein P-II 70 177 IPR002187 GO:0006808|GO:0030234
Tpr6g0436 193 SMART P_II_3 72 174 IPR002187 GO:0006808|GO:0030234
Tpr6g0436 193 ProSitePatterns P-II protein C-terminal region signature. 152 165 IPR017918 GO:0006808|GO:0030234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0436 - - gmx:100499915 271.937