Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0431 ATGTCAAAACTTAGGTTGGAAGGTAAGGTTGCTATAGTGACAGGGGCGGCAAGCGGAATAGGAGCAGAGACGGTGAAAACATTTGTCGAAAATGGAGCATTTGTAGTTATAGCAGATATTAATGATGAATTAGGCCACCAAGTTGCAACTTCAATTGGGTTAGACAAAGTGAGCTACCACCATTGCGACGTTAGAGATGAAAAACAAGTTGAAGCAACCGTAGCATTCGCCTTAGAGAAATACGGCACATTAGATATTATGTTCAGCAATGCTGGAATTGGAGGAGCTATACATAGCATACTAGAACTTAATCTTAATGAATTTGACAATATGTTGGCCATCAATATTCGTGGATCGGCTGCATCTATCAAACACGCCGCGCGTGTCATGTTGGAAAGAAAAATACGCGGATCCATAATTTGTACGACCAGTGTAGTTGCCGCTATTGCTGGAAGTACCGGTCATGATTACACAACATCTAAAAGTGGTCTTTTAGGCCTTGTTCGCTCGGCGTGCGGTGAGCTTGGAGCTTACGGAATCAGGGTCAATTCAATTTCGCCGTACGTTGTTGGCACACCTCTTACATGTAGTGAACTGAACATGGAGGTGAGTGAAGTTGAAGCTATTGGGATTGGTTCTTCTAATTTGAAAGGAATTACATTGAAGACTACTCATATTGCAGAAGCTGCTTTATTTCTTGCATCAGATGAATCAGCTTATATTAGTGGACACAATTTGGTGGTTGATGGAGGTTTTTCTGTCATTAATAGTTGTGTTCCTTAG 783 0.4151 MSKLRLEGKVAIVTGAASGIGAETVKTFVENGAFVVIADINDELGHQVATSIGLDKVSYHHCDVRDEKQVEATVAFALEKYGTLDIMFSNAGIGGAIHSILELNLNEFDNMLAINIRGSAASIKHAARVMLERKIRGSIICTTSVVAAIAGSTGHDYTTSKSGLLGLVRSACGELGAYGIRVNSISPYVVGTPLTCSELNMEVSEVEAIGIGSSNLKGITLKTTHIAEAALFLASDESAYISGHNLVVDGGFSVINSCVP* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0431 260 PANTHER OXIDOREDUCTASE-RELATED 1 260 - -
Tpr6g0431 260 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 260 - -
Tpr6g0431 260 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 254 IPR036291 -
Tpr6g0431 260 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
Tpr6g0431 260 Gene3D - 1 259 - -
Tpr6g0431 260 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Tpr6g0431 260 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Tpr6g0431 260 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Tpr6g0431 260 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Tpr6g0431 260 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Tpr6g0431 260 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Tpr6g0431 260 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Tpr6g0431 260 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Tpr6g0431 260 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Tpr6g0431 260 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 144 172 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0431 Tpr-Chr6 3499400 3500585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0431 6 251 Acyl Lipid Metabolism Gene Families AT3G55290 30.502 7.02e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0431 - - gmx:100798299 379.793