Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0423 ATGCAAATCGATTCAGCGAATGAAGCAACAATGGTGATGGAAGAAGAAGATCAACGCTTAACTGAATGGCGTCTTCATCCTGGCCCTTACCTTGGCGACATCTCAGCTCTCTGTTTTCTTCATCTCCCCAATCACTCTCTTCCTCTTCTTCTAGCTGGTTTGGGTTCGGAAATTCTGTTATACGATTTAGAACTTGGAAACATAATGAAATCGTTTTCCGTTTTCGACGGAGTTCGTGTTCACGGGATTACTTCTAGTTCTGAATCTGTAATTGCTGTGTTTGGAGAAAAAAGAGTTAAACTGTTTACTTCTACTTTTGAAAATGATGATTCTGGGAAGCCACTGTTAACGTTGATTCATTCGTTGCCGAAATTTGGTCACTGGGTTTTGGATGTTTGCTTCATCAAGGGTTGTTTACCTTGTTCGAATGTGGAGAGTGATTTTCTGGCTATAGGATGTAGTGACAATTCAGTTCACGTATGGGACATTTCCAGTTCTAAAACTGTTCTCAAGGTTCAATCACCAGTACAATGCCTTCTGTACACAATGAGATTATGGGGTCACAATCTTGACGTTCTCCGTATTGCATCCGGTACAATATTTAATGAGATTGTTGTTTGGAAAGTGGCCCCTCAACATGATAAATCTTCAAGAACTCCAGAAAACCATGACCATCAGGGCTCCAATTGCAGCTCACTAAAAGACAATCTGTATGAGGCTTTTCACATATGTAAACTTGTTGGACATGAAGGTTCAATCTTCCGAATAGCATGGTCGTCTTCTGGATCAAAACTGGTATCTGTTTCTGATGACCGTAGCGCACGTGTCTGGGATGTTCCTATTGAAAGGGAAGATTCATTGTACCATGATCCCATTGCCATTGTCTTATTTGGACATAATGCTCGAGTTTGGGACTGCTGTATTTCTGATAATTTTATTGTCACTGTCAGCGAGGATTGTACATGTCGTATATGGGGAATTGATGGTGAACAGCTGCAAGTCATTAGGGAGCACATAGGAAGGGGTATATGGAGATGTCTGTATGACCCAAATTTGTCAATTGTTATAACTGCTGGATTTGACTCTGCTATCAAGGTGCATAGGCCTCATGCTTGTCTGTCCAGGGGTTTGGCAGCAGCACAATTGTCCCCTGAAAGCACAGAGATATTTTCCATTAGCATCCCTGATGTGTTGGAGCATGTTGGATTGATGGACAGCAAGAGTGAATACGTTCGTTGTTTGCGTTTTTCTTCTCAGGATTCTCTTTACGTCGCTACCAATCATGGTTATCTCTACCATGCTAAATTATGTGAGGCCGGAGGCGCTCATTGGAATCAGCTTGTTCAGGTCAGCAATGGGGCTCCAATTATCTGTATGGATTTATTGTCCAAGGACTCATTTGAACTTGGATGTGGTGAGGAGGATTGGATCGCTGTTGGAGATGGTAAAGGAAACATGACAGTTATTGGAGTTACAAAGAATGATTGTACTCCTACAGTTATATCGAGCTTTACTTGGCAAGCTGAAGTGGAGAGACAGCTCTTGGGTACTTATTGGTGCAAATCTTTGGGATGCAGGTATGTCTTTACGGCTAACCCTAGAGGAGGATTGAAACTCTGGAGGTTGCCTGACCCTTCACAATCTAATAGTCAGATCTCCGTGAGGAATAACATTGTCTCACACGCAGCAGAGTTCATATCAAGTTATGGAATGCGGATAATGTGTTTGGATGCATGCTTGGAGGAAGAGGTCCTAGCATGTGGAGATGTACGTGGTAATATGGTTTTATTTCCTTTGCTAAAGAATCTGGTGTTGGGCACATCTGTTGCACAAGAGATGAAAATAACCCCAGTAAATCATTTTAAAGGAGTTCACGGGATTTCAAGTGTCTCTAGTGTTGTTGTGACCAAGCTTGTTTACAATCAAATCGAGATACGCTCAACCGGAGCAGATGGTTGTATATGCTATCTGGAATATGATAGAGAAATGCAGAATTTTCAATTTACGGGGATGAAACAAGTCAAAGAATTGACTTTGATTGAGCATGTTTCTGTTGATAACAACTCTGAAGATGCATCATCAAGAAGCTATGCAGCAGGTTTTGCATCTGTAGATTTCATAGTATGGAACTTAGCCAATGAGAATAAGGTGATGAAAATTCCATGTGGTGGCTGGCGGCGTCCTCATTCCTATTTTCTTGGTGACATACCTGAGATGAAGAACTGTTTTGCCTTTGTTAAGGATGAAATTATATATATACATAGACACTGGGTTAATGATAACGGTGGGAAGATATACCCTATGAGTTTGCATATGCAATTCCATGGGAGAGAAATACATTCCTTGTGCTTTATATATGAAGATATGCTTCTCGGAGATAATTATAAGCATGCATTATTTTCTAAATCAAGTTGGATTGCAACTGGATGTGAAGATGGGACTGTGAGATTGACTTGGTACTCTCCAGGTATTAAGAATTGGTCCATGTCAAAATTGCTTGGTGAGCATGTTGGAGGATCAGCTGTACGATCAATTTGTTGTGTCTCAAAACTACACACCATTCCATCAGTTACAAGCAATGTACCTGGTGAGAGGAGCGAACTAATTGCTGCAAATGAGGACAAAGATAATCCAACTTTACTAATATCTGTGGGTGCAAAGCGTGTCTTAACTTCTTGGTTACTTAAAAGTAAGAGGGACAACAAAACTGATTTACTAACTGATAATCAGCATAATTCAAAAGAAGTTGATGATCAAATTTTGTCAAATTTGTCCTCTTCAATGACGTTCCAGTGGCTTTCCACTGACATGCGAACCAAATATTCAACTACACACAGATATGCAGAAAATAAAGTAGTTGGTGTTGCTGAAAATGGTTCTAATATAAAAGTTGGCGCTGAACCTGGATCACTGGTTTCTGAAGGCGGAATGATGAGCTTGGTCAGAGATCAACATGAGGATGACTGGAGATATCTTGCAGTCACTGCTTTTCTTGTTAAATGTGCTGGTTCCAGGATATCTGTCTGTTTTGTTGTTGTTGCTTGTTCAGATGCTACAGTTATGTTACGGGCTTTAGTTTTGCCCTTTCGCTTATGGTTTGACATCGCATTACTTGTTCCTTTATTGGCACCTGTTTTGTCACTGCAACACATCATCTTTCCCATTCGTAGGCCTTATAAAGATAACATACAAGTTGGAAATGGTTACATTGTGATTAGTGGATCTACTGATGGGAATGTTACATTTTGGGATCTGACTGACAGTGTGGAAGCTTTTATGCAGAGAGTTTCAGTTTGTGATGTAGAGAAGCTTTTTGACTGTCAAAAACGACCACGCACGGGGAGAGGGAGTCAGGGTGGTAGACAGTGGAGATCTTTAAGAATTGGGTTATCAAAGAAAAGACAAGATAACAATTTGGCGACTTCAAAAGCAAAAAACAATGATGAAAGCATCAATTCTACTACAAATGGGACCTCTTCAGTGCCAAATAAATCTGAAGACAGCAATATGGTTTGTTCTCAAGCTATGCATACAGCTTCCCCAGAGTTAGAAACTAAGACTGATGATTCATCAGTGGAAATATGTGAAATACAGTCTCTACGCCTTTTAAAAAATGTTCACCAATCTGGTGTCAATTGTCTACATGTTTCAGAGATAAAAGGTGGGCAAAATAATGATACTTGTTTGTACAGCATAGTTAGTGGGGGTGATGATCAATCAATTCATCATCTTGTGGTTGAGTTATCACCTAAAACAATAACTGTAACACATTTGGTCACTGAACCTGAATATATAAAGGACTCCAATTTTCTAAATCAGAGTAGAAACTACAATATCAGATTCTTAAATTCTGAAAAGTTTCCTTCGGCCCACAGCTCTTCTGTGAAAGGTGTCTGGACGGATGGATCTTGGGTGTTTTCGACTGGACTTGATCAGCGGGTCAGATGCTGGCATCTTCAGCAGAATAAACTAATAGAACGTGCACACCTAATAGTTAGTGTGCCGGAGCCAGAAGCATTATCTGCTAGGGCTTATAGCAGGAATCATTATCAAATTGCTGTTGCTGGAAGAGGGATGCAAATAGTGGACTTCTCAGGATGCTAA 4104 0.4038 MQIDSANEATMVMEEEDQRLTEWRLHPGPYLGDISALCFLHLPNHSLPLLLAGLGSEILLYDLELGNIMKSFSVFDGVRVHGITSSSESVIAVFGEKRVKLFTSTFENDDSGKPLLTLIHSLPKFGHWVLDVCFIKGCLPCSNVESDFLAIGCSDNSVHVWDISSSKTVLKVQSPVQCLLYTMRLWGHNLDVLRIASGTIFNEIVVWKVAPQHDKSSRTPENHDHQGSNCSSLKDNLYEAFHICKLVGHEGSIFRIAWSSSGSKLVSVSDDRSARVWDVPIEREDSLYHDPIAIVLFGHNARVWDCCISDNFIVTVSEDCTCRIWGIDGEQLQVIREHIGRGIWRCLYDPNLSIVITAGFDSAIKVHRPHACLSRGLAAAQLSPESTEIFSISIPDVLEHVGLMDSKSEYVRCLRFSSQDSLYVATNHGYLYHAKLCEAGGAHWNQLVQVSNGAPIICMDLLSKDSFELGCGEEDWIAVGDGKGNMTVIGVTKNDCTPTVISSFTWQAEVERQLLGTYWCKSLGCRYVFTANPRGGLKLWRLPDPSQSNSQISVRNNIVSHAAEFISSYGMRIMCLDACLEEEVLACGDVRGNMVLFPLLKNLVLGTSVAQEMKITPVNHFKGVHGISSVSSVVVTKLVYNQIEIRSTGADGCICYLEYDREMQNFQFTGMKQVKELTLIEHVSVDNNSEDASSRSYAAGFASVDFIVWNLANENKVMKIPCGGWRRPHSYFLGDIPEMKNCFAFVKDEIIYIHRHWVNDNGGKIYPMSLHMQFHGREIHSLCFIYEDMLLGDNYKHALFSKSSWIATGCEDGTVRLTWYSPGIKNWSMSKLLGEHVGGSAVRSICCVSKLHTIPSVTSNVPGERSELIAANEDKDNPTLLISVGAKRVLTSWLLKSKRDNKTDLLTDNQHNSKEVDDQILSNLSSSMTFQWLSTDMRTKYSTTHRYAENKVVGVAENGSNIKVGAEPGSLVSEGGMMSLVRDQHEDDWRYLAVTAFLVKCAGSRISVCFVVVACSDATVMLRALVLPFRLWFDIALLVPLLAPVLSLQHIIFPIRRPYKDNIQVGNGYIVISGSTDGNVTFWDLTDSVEAFMQRVSVCDVEKLFDCQKRPRTGRGSQGGRQWRSLRIGLSKKRQDNNLATSKAKNNDESINSTTNGTSSVPNKSEDSNMVCSQAMHTASPELETKTDDSSVEICEIQSLRLLKNVHQSGVNCLHVSEIKGGQNNDTCLYSIVSGGDDQSIHHLVVELSPKTITVTHLVTEPEYIKDSNFLNQSRNYNIRFLNSEKFPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWHLQQNKLIERAHLIVSVPEPEALSARAYSRNHYQIAVAGRGMQIVDFSGC* 1368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0423 1367 Gene3D - 7 239 IPR015943 GO:0005515
Tpr6g0423 1367 SUPERFAMILY WD40 repeat-like 524 1243 IPR036322 GO:0005515
Tpr6g0423 1367 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 246 279 - -
Tpr6g0423 1367 ProSitePatterns Trp-Asp (WD) repeats signature. 265 279 IPR019775 -
Tpr6g0423 1367 Gene3D - 444 904 IPR015943 GO:0005515
Tpr6g0423 1367 Pfam WD domain, G-beta repeat 119 162 IPR001680 GO:0005515
Tpr6g0423 1367 Pfam WD domain, G-beta repeat 297 325 IPR001680 GO:0005515
Tpr6g0423 1367 Pfam WD domain, G-beta repeat 245 278 IPR001680 GO:0005515
Tpr6g0423 1367 Gene3D - 1060 1364 IPR015943 GO:0005515
Tpr6g0423 1367 ProSiteProfiles Trp-Asp (WD) repeats profile. 246 279 IPR001680 GO:0005515
Tpr6g0423 1367 SUPERFAMILY WD40 repeat-like 30 208 IPR036322 GO:0005515
Tpr6g0423 1367 SMART WD40_4 1280 1318 IPR001680 GO:0005515
Tpr6g0423 1367 SMART WD40_4 328 368 IPR001680 GO:0005515
Tpr6g0423 1367 SMART WD40_4 1045 1084 IPR001680 GO:0005515
Tpr6g0423 1367 SMART WD40_4 767 819 IPR001680 GO:0005515
Tpr6g0423 1367 SMART WD40_4 239 278 IPR001680 GO:0005515
Tpr6g0423 1367 SMART WD40_4 115 162 IPR001680 GO:0005515
Tpr6g0423 1367 SMART WD40_4 289 326 IPR001680 GO:0005515
Tpr6g0423 1367 ProSiteProfiles Trp-Asp (WD) repeats profile. 1067 1093 IPR001680 GO:0005515
Tpr6g0423 1367 ProSiteProfiles Trp-Asp (WD) repeats profile. 145 171 IPR001680 GO:0005515
Tpr6g0423 1367 SUPERFAMILY WD40 repeat-like 1067 1330 IPR036322 GO:0005515
Tpr6g0423 1367 SUPERFAMILY WD40 repeat-like 142 542 IPR036322 GO:0005515
Tpr6g0423 1367 MobiDBLite consensus disorder prediction 1137 1169 - -
Tpr6g0423 1367 PANTHER WD REPEAT PROTEIN 18 1366 - -
Tpr6g0423 1367 Gene3D - 240 433 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0423 K24737 - gmx:100780968 2081.6