Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0419 ATGGCAGTCATGGCGACAATAATGAATAGGCAGCATTTGCTGACCTACATCTACCTTCTGGTTTACATTTCACTTTCCTCGGGTGTTATTTTGTATAACAAGTGGGTTCTCTCTACGCTGTATTTTAATTTTCCATTTCCAATAACACTCACTATGATCCATATGGCTTTTTCTGGTGGAGTTGCATTTTTCCTTATCCGTGTTCTGAAGGTTGTAGCGCCTATTAAAATGACATTTCACATATATATAACCTGTGTGGTCCCTATAAGCGCCTTCTTTGCAGCAAGTCTGTGGTTTGGGAACACTGCTTATTTGTACATTTCTGTGGCTTTCATCCAGATGCTTAAAGCCCTGATGCCAGTGGCAACATTTCTTGTGGCTGTTACTCTTGGAACTGAGAAATTAAGGTGTGACGTATTCTGGAACATGGTGTTGGTTAGTGTTGGAGTTGTCATTTCCTCCTACGGGGAAATTCATTTTAACGTGCTGGGTACGGTTTATCAAGTATCGGGAATAGCTGCTGAAGCATTGAGGCTGGTCTTAACTCAAGTTCTTCTTCAAAATAAAGGCTTGACACTAAATCCTATTACCAGCCTGTATTACATAGCCCCCTGCAGCTTTGTGTTCCTTTTTATTCCATGGTATATCCTTGAGAAGCCTGAGATGGAAGCTCCACATATGGAGTTTAACTTCTGGATATTTTTTTCAAATGCTCTTTGTGCTTTGGCATTGAACTTCTCAACGTTCTTGGTGATTGGTAGAACTGGGGCTGTAACTATTCGAGTGGCTGGAGTTTTGAAAGACTGGCTACTTATCTCTCTTTCAACTGTCTTATTTCCTGAATCAAAGATTACAGGACTGAATGTCATTGGCTATGCTATTGCTTTAAGCGGTGTTGTTTGTTACAACTACCTGAAGATCAGGGATGTGCGCAGATCTCAACTTCAAATTAACCCCGACGAATCAGCAAAGGAGCTGCTAACGGAGAAAAAGGGAGATGATGATAATGATGAGGATATATGGAATAATTCAGTTTCTGATTCTCATCATCATTCTCATTTTGATGAAGAAGCGCCTTTAATGTATTCATCACGGATATCTCATCTCGGAAGAAAACCAGCTCTGGCTAGACCATGCAATGAAGGTTCTATTTGTTCCACATGGATCGATATAACTCTGATCGATGATTCTGAAGTTGCTAGTGTACTCGATATTTATTTTTAA 1224 0.4011 MAVMATIMNRQHLLTYIYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGGVAFFLIRVLKVVAPIKMTFHIYITCVVPISAFFAASLWFGNTAYLYISVAFIQMLKALMPVATFLVAVTLGTEKLRCDVFWNMVLVSVGVVISSYGEIHFNVLGTVYQVSGIAAEALRLVLTQVLLQNKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEMEAPHMEFNFWIFFSNALCALALNFSTFLVIGRTGAVTIRVAGVLKDWLLISLSTVLFPESKITGLNVIGYAIALSGVVCYNYLKIRDVRRSQLQINPDESAKELLTEKKGDDDNDEDIWNNSVSDSHHHSHFDEEAPLMYSSRISHLGRKPALARPCNEGSICSTWIDITLIDDSEVASVLDIYF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0419 407 Pfam Triose-phosphate Transporter family 17 303 IPR004853 -
Tpr6g0419 407 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 1 339 - -
Tpr6g0419 407 PANTHER SOLUTE CARRIER FAMILY 35 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0419 Tpr-Chr6 3410080 3415723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0419 4 371 Organic Solute Cotransporters AT3G17430 74.663 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0419 - - gmx:100779373 631.713