Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0399 ATGGATTATTCAAATGTGAGGGATTTCATAGCAAAGGAAGTTCCCGACTGGAACAACGAAGTAATTACCGTTGCTAGATTCAAAGCTTTTTCCGGTCAAAGATCCGATTGGCAACCAAATTTCATCTTCTGGAGAGATTTGATCATCAAAATCGCCACCCATTTTCGTTTCCTCATCGTCCAACCTTCTCAGGTCAAAAATGATTGGTTTAATCGAGGAGGGTTAACCCCTTTGTGTATCGATGATGTACTGTCTCTAATGTATAATGAAGGTGACATCACAAGACCTGGGGATCTTGTTGATCCAAGGAGTGGAAGATTTTCCCAATTAGTCAGAAAAGTGACCAACTTAATAACCAGACCAGCTACACCAGATATCATGGCTGAAGAATCTGTCATCCTAACTCCTCTGCTTAAGGATAAGGCTGCTGAAGTTGTCAAACATCTTTCAGAAAGTCATTGGAATTCATCTTGTATCATCACGATGAAGAAATTTCAGGAGGTATGTGGAGGGCCAGATGAAGCTTCTGTAATGTTGAGGTATTTGTCAGGATGTAGGACAGCACAGTATCTGTCAGTCCTTAAAAATGAGTTTGTAGAGGGGGTAAAAATTTCGCTCTCAGCAGCAGCATTATCCAGTGTGTCTAATTTAGATTGTGATGTACTGTACTTGATTTGGACAGTTGAGAAGCTTCAGCAACAATTAGATGTGATTGACAGGCGCTGTGAATTGTCAAGAAAATCAGCAGTGGCTTCTCTACATTCCGGGAACAAAAAATTAGCCCTGAGGTATGCAAGGGAGCTGAAGTTGGTCACCCAGAGTAGGGAAAAATGTTCATCACTTTTGAACAGAGTAGAGGAAGTATATGGTGTTATTGTTGACGCCGAGTCAACGAAAACGGTTTCTGAAGCTATGCAGATTGGAGCACGTGCTATTAAAGAAAATAAGATAAGCGTGGAAGATGTTGATATTTGTTTAAGAGATCTGCAAGAGAGCATTGATTCACAAAAGGAAGTTGAAAAGGCACTAGAGCAAACTCCATCATACACAGATATCGATGATGAAGATATTGAAGAAGAACTCAAAGAGTTAGAGCTGGCTCTTGAGAAAGAGGCTCAAGTTGATACACCAGAAAAGACTATTACTACTGAAGAAGGAACTGCAACTTTGGAAGCCGCTGAATTACTTAGTGACACTCTCTCAAATCTCAAACTTTCAGACAGTCCAGCTGTGAAGTCAAGAACCACTCAGGCAATGTCAGAAGGCGAGAAAACAGCAAATTTAGTAATGTAA 1293 0.4053 MDYSNVRDFIAKEVPDWNNEVITVARFKAFSGQRSDWQPNFIFWRDLIIKIATHFRFLIVQPSQVKNDWFNRGGLTPLCIDDVLSLMYNEGDITRPGDLVDPRSGRFSQLVRKVTNLITRPATPDIMAEESVILTPLLKDKAAEVVKHLSESHWNSSCIITMKKFQEVCGGPDEASVMLRYLSGCRTAQYLSVLKNEFVEGVKISLSAAALSSVSNLDCDVLYLIWTVEKLQQQLDVIDRRCELSRKSAVASLHSGNKKLALRYARELKLVTQSREKCSSLLNRVEEVYGVIVDAESTKTVSEAMQIGARAIKENKISVEDVDICLRDLQESIDSQKEVEKALEQTPSYTDIDDEDIEEELKELELALEKEAQVDTPEKTITTEEGTATLEAAELLSDTLSNLKLSDSPAVKSRTTQAMSEGEKTANLVM* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0399 430 PANTHER SNF7 FAMILY PROTEIN 103 406 - -
Tpr6g0399 430 Coils Coil 354 374 - -
Tpr6g0399 430 Pfam Snf7 229 377 IPR005024 GO:0007034
Tpr6g0399 430 MobiDBLite consensus disorder prediction 411 430 - -
Tpr6g0399 430 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 103 406 IPR005024 GO:0007034
Tpr6g0399 430 Coils Coil 326 346 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0399 K15053 - gmx:100783674 599.356