Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0392 ATGAAGGAACCAGAAGAAGTGATGAGAATGCGAGGTGGTTGTGTACTTGGAAAGAAAACTATTCTGAAGAGTGACCATTTTCCTGGTTGTCAGAATAAGCGATTATCTCCTCAGATCGATGGTGCTCCTAATTATCGTCAAGCTGAGTCTTTGCATGTTCATGGTGTTGCTATTCCAACCCTTGATGGAATCAGAAATGTTCTTAATCACATTGGTGCTCGCTTACAACGGAACAAAAGACAAAATGTTCTTTGGATTAGTCTTCGTGAAGAACCGCTTGTGTACATTAATGGCCGCCCTTTTGTTTTACGCGATGTGGAGAGACCATTCTCCAACCTTGAGTATACGGGAATTAATAGGGAGCGGGTTGAACAAATGGAAGCTCGTTTGAAAGAAGACATTCTGTTGGAAGCTGAAAGATATGGAAATAAGATCCTTGTGACGGATGAACTGCCCGATGGTCAGATGGTGGACCAATGGGAACCGGTGTCGTGTGATTCTGTGAAGACACCATTAGAGGTGTATGAGGAATTGCAAGTGGAGGGATACCGTGTTGATTATGAACGTGTTCCTATAACTGATGAAAAATCGCCTAAGGAACTGGATTTTGATATTTTGGTAAATAAAATTTCTCAAGCTGATGTCAGTTCAGAGATAATTTTTAATTGTCAAATGGGGCGTGGACGAACGACAACTGGAATGGTCATCGCAACTTTGGTCTACCTCAATCGAATTGGGGCCTCTGGGATTCCAAGAAGCAATTCAATGGGTAGAATTTTTCAATATATGGCCAATGTTGCTGACCATTTGCCCAGCTCAGAGGAGGCGATTCGCAGGGGAGAATATGCAGTCATAAGAAGCTTGGTTCGGGTGTTAGAGGGTGGTGTTGATGGGAAACGGCAAGTGGACAAAGTAATTGACAAATGTGCTTCAATGCAGAATCTGCGTGAAGCAATTGGCACCTATCGCAATAGCATTCTGCGACAACCAGATGAGATGAAAAGGGAGGCATCACTTTCATTTTTTGTAGAGTATTTGGAGAGATACTACTTTTTAATATGTTTTGCTGTGTACCTTCATTCAGAAAGGGATATGCTCCATTCTAGCACTGCTGGTCACAGTAGTTTTTCTGACTGGATGAGAGCAAGGCCGGAACTCTACAGCATTATTCGCAGGTTACTCAGGAGAGATCCAATGGGTGCACTTGGATATTCAAGTTTGAAACCATCTTTAAAGATGATAGCTGAATCAACTGATGGCCGGCCATCTGAGATGGGTAATGTTGCTGCCTTGAGAAAAGGCGAGGTTCTTGGTAGTCAAACTGTTCTAAAAAGTGATCACTGCCCTGGATGCCAAAATCCGAGTTTGCCAGATAGAGTGGACGGTGCTCCTAATTTTCGAAAAGTTCCTGGATTTCCAGTTTTTGGTGTTGCGAATCCAACCATTGATGGTATCCGATCTGTCATTCATAGGATTGGCAGTACTAATGGTGGACGGCCAATACTTTGGCATAATATGAGAGAAGAGCCTGTTATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTTGAAAGACCATACAAAAACATGTTGGAGTACACGGGTATTGACCGTGAAAGAGTGGAGAAAATGGAAGCTCGATTAAAAGAGGACATTTTAAGGGAAGCTAAACAATATAGCAGTGCCATAATGGTTATTCATGAAACAGATGATGGACATATATTTGATGCTTGGGAGAATGTTAGCTCTGATGTGATTCAAACCCCACTTGAAGTTTTCAAAAGCCTGGAAGCTGAGGGGTTTCCCATTAAGTATGCACGTGTGCCCATCACCGATGGAAAAGCTCCTAAACGTTCTGACTTTGATACTTTGGCAATTAATATTGCTTCTGCCGCAAAGGACACTGCTTTAGTTTTCAATTGTCAGATGGGTAGGGGGAGGACGACTACCGGTATGGTCATCGCCTGCCTTGTGAAACTTCGTATTGATTTCGGTAGGCCCATTAAAATATTGAACGATTATATGACCCAAGAAGAATCAAATGGCGGTTCTTCAAGTGGAGATGAAGCTTTGGCCTGTGTCGCTGCATTGACCTCAAATAATTCACAAACGAAGATAGACGAGAAACAAAACCGTGTTTTTGGTATAAATGACATTCTCTTGTTATGGAAGATAACCACCTTATTTGATAATGGCGTTGAATGCCGAGAGGCATTAGATGCTGTCATTGATAGATGTTCTGCACTTCAAAACATTCGCCAGGCTGTCCTACAATATAGAAAAGTATTCAATCAACAGCATGTTGAGCCTAGGGTAAGGAGGGTGGCTTTAAATCGTAGTGCTGAGTACTTGGAGCGGTACTTCCGTCTAATTGCTTTTGCAGCATATCTTGGAAGTGAAGCATTCGATGGGTTTTGTGGACAAGGAGAATCCAGAATGACATTTAAGGTTTGGTTACGTCAGAGGCCAGAAGTACAGGCTATGAAATGGAGCATCAGATTAAGACCGGGGAGATTTTTCACTGTCCCTGAGGAGTTGAGAGAATCACAAGAGTCTCAGCATGGAGATGCGGTGATGGAGGCTACTGTCAAGGCCAGAAATGGTTCTGTTTTGGGGAAGGGCTCCATACTTAAAATGTATTTCTTTCCTGGACAGAGAACTTCCAATAATATACAAATACATGGTGCACCTCATGTTTACAAGGTTGATGAATACCATGTATGTTGCATGGCAACTCCAACCATTTCTGGGGCCAAGGAGATGCTAAACTATTTGGATGCTAAGTCTAAACCTGGGTTCACTGCTCGAAAAGTTATATTGACCGATGTAAGAGAAGAAGCGGTTGTTTATATCAATTGTGTTCCCTTTGTCCTTAGGGAGTTAAACAAACCTGTTGATACACTCAAACACGTTGGAATCACCGGTCCTGTGGTTGAACACATGGAGGCACGGCTGAAAGAAGACATACTGGCTGAAATTACACAGTCTGGTGGGAGAATGCTACTACACCGTGAAGAATATGACCCCTCCACAAATCAATCTGCTGTGGTTGGATACTGGGAAAACATTCTGGCAGATGACGTTAAGACGCCAGCAGAAGTTTATTCTCTTCTAAAAGATGATGGATATGATATTGTCTATCGGAGGATACCCTTAACAAGAGAAAGAGATGCCTTGGCCTCTGATGTTGATGCAATACAGTACTGTCAAGATGACTCTGCAGGGAGTTACCTCTTTGTATCGCACACAGGATTTGGTGGAGTTGCATATGCAATGGCCATTATCTGTATTAGACTTGGTGCAGAGGCAAACTTTGCATCCAAAGTCCTGCAACCATCATTTGGTCCTGATTCACATACTGTGATTGATGAGAATTCGCTTTCTCGAGCTTCTGATGAAACAGCGCTTAGGATGGGCGATTATCGTGACATTTTGAACCTTACAAGAGTCCTCATTCATGGTCCCCAAAGCAAAGCAGATGTTGACATTGTCATTGAAAGATGTGCAGGCGCAGGGCATATACGAGATGATATTCTTCATTACAATAGAGAATTTCAGAAGTTCACAGATGATGATGACGAGGAGCGTGCATATCTTATGGACATGGGTATCAAGGCTTTGAGACGGTACTTTTTCCTTATCACATTCAGATCGTATCTCTATTGCACATCTCCTGACGATACAGAATTTGCTTCATGGATGGATGCAAGACCGGAGCTTGGTCATCTATGTAACAATCTAAGAATAGATAAATAG 3759 0.4248 MKEPEEVMRMRGGCVLGKKTILKSDHFPGCQNKRLSPQIDGAPNYRQAESLHVHGVAIPTLDGIRNVLNHIGARLQRNKRQNVLWISLREEPLVYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILLEAERYGNKILVTDELPDGQMVDQWEPVSCDSVKTPLEVYEELQVEGYRVDYERVPITDEKSPKELDFDILVNKISQADVSSEIIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRSNSMGRIFQYMANVADHLPSSEEAIRRGEYAVIRSLVRVLEGGVDGKRQVDKVIDKCASMQNLREAIGTYRNSILRQPDEMKREASLSFFVEYLERYYFLICFAVYLHSERDMLHSSTAGHSSFSDWMRARPELYSIIRRLLRRDPMGALGYSSLKPSLKMIAESTDGRPSEMGNVAALRKGEVLGSQTVLKSDHCPGCQNPSLPDRVDGAPNFRKVPGFPVFGVANPTIDGIRSVIHRIGSTNGGRPILWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVEKMEARLKEDILREAKQYSSAIMVIHETDDGHIFDAWENVSSDVIQTPLEVFKSLEAEGFPIKYARVPITDGKAPKRSDFDTLAINIASAAKDTALVFNCQMGRGRTTTGMVIACLVKLRIDFGRPIKILNDYMTQEESNGGSSSGDEALACVAALTSNNSQTKIDEKQNRVFGINDILLLWKITTLFDNGVECREALDAVIDRCSALQNIRQAVLQYRKVFNQQHVEPRVRRVALNRSAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKVWLRQRPEVQAMKWSIRLRPGRFFTVPEELRESQESQHGDAVMEATVKARNGSVLGKGSILKMYFFPGQRTSNNIQIHGAPHVYKVDEYHVCCMATPTISGAKEMLNYLDAKSKPGFTARKVILTDVREEAVVYINCVPFVLRELNKPVDTLKHVGITGPVVEHMEARLKEDILAEITQSGGRMLLHREEYDPSTNQSAVVGYWENILADDVKTPAEVYSLLKDDGYDIVYRRIPLTRERDALASDVDAIQYCQDDSAGSYLFVSHTGFGGVAYAMAIICIRLGAEANFASKVLQPSFGPDSHTVIDENSLSRASDETALRMGDYRDILNLTRVLIHGPQSKADVDIVIERCAGAGHIRDDILHYNREFQKFTDDDDEERAYLMDMGIKALRRYFFLITFRSYLYCTSPDDTEFASWMDARPELGHLCNNLRIDK* 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0392 1252 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 6 245 IPR029021 -
Tpr6g0392 1252 SMART PTPlike_phytase_2 86 241 - -
Tpr6g0392 1252 SMART PTPlike_phytase_2 942 1100 - -
Tpr6g0392 1252 SMART PTPlike_phytase_2 504 660 - -
Tpr6g0392 1252 CDD PTP_paladin 11 309 - -
Tpr6g0392 1252 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 2 337 - -
Tpr6g0392 1252 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 602 1252 - -
Tpr6g0392 1252 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 341 482 - -
Tpr6g0392 1252 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 422 602 - -
Tpr6g0392 1252 PANTHER METAL ION-BINDING PROTEIN 341 482 - -
Tpr6g0392 1252 PANTHER METAL ION-BINDING PROTEIN 2 337 - -
Tpr6g0392 1252 PANTHER METAL ION-BINDING PROTEIN 422 602 - -
Tpr6g0392 1252 PANTHER METAL ION-BINDING PROTEIN 602 1252 - -
Tpr6g0392 1252 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 431 665 IPR029021 -
Tpr6g0392 1252 CDD PTP_paladin 432 747 - -
Tpr6g0392 1252 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 861 1090 IPR029021 -
Tpr6g0392 1252 Pfam Inositol hexakisphosphate 943 1098 - -
Tpr6g0392 1252 Pfam Inositol hexakisphosphate 86 240 - -
Tpr6g0392 1252 Pfam Inositol hexakisphosphate 504 660 - -
Tpr6g0392 1252 Gene3D Protein tyrosine phosphatase superfamily 879 1112 IPR029021 -
Tpr6g0392 1252 Gene3D Protein tyrosine phosphatase superfamily 444 690 IPR029021 -
Tpr6g0392 1252 Gene3D Protein tyrosine phosphatase superfamily 20 287 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0392 Tpr-Chr6 3203822 3215102 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0392 - - gmx:100788460 2210.65