Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0386 ATGCTGAGATTAAAAGCGTTTCGTCCTTCCACTGATAAAGTCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTTACTGCTGATGATTCAGATCGAGTTTCTGTTTGGAACTGGGAACACCGTCAGGTGATATATGAGTTGAAAGCTGGTGGAGTCGATGAACGGCGTTTAGTTGGTGCAAAATTGGAGAAGCTAGCTGAGGGAGAAACAGAATCTAGAGGAAAACCAACAGAAGCCATTCGTGGAGGAAGTGTGAAGCAGGTGAATTTTTATGATGACGACGTACGCTTTTGGCAAAATTGGCATAATCGCTCTGCAGCGGCAGAGGCTCCAACAGCTGTCCATACTTCATCTTTTAGTTCTCCCGCCCCATCAACAAAAGGGAGGCATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTTTGGACTTGGTGACAATGCGTGGCCGTGATGTACCAAAGCAAGAGCTCGATAACAAGTCCCTACACTGCATGGAGTTCCTTTATAGATCTGGTGTTGGTGACGGTCCTCTTGTGGCTTTTGGTGCATCTGATGGAGTCATTAGAGTTCTCTCAATGATTACATGGAAGCTTGCGAGAAGATACACTGGAGGTCATAAAGGAACAATCTCTTGCTTGAGGTCCTTCATGGCAGCTTCAGGCGAGGCTCTTCTGGTTTCGGGTGCTAGTGATGGATTGCTCATAATTTGGAGTGCCGATCATGGACAAGATTCACGTGAACTTGTACCGAAGCTGAGTTTAAAAGCACATGATGGCGGTGTTGTGGCAGTTGAACTGTCTAGAGTGATGGGAGGAGCTCCTCAGCTAATTACAATTGGTGCGGATAAGACATTAGCTATATGGGACACGGTCTCCTTTAAGGAGCTGCGGCGTATAAAACCAGTTCCAAAATTGGCTTGCCACAGTGTGGCTTCTTGGTGCCATCCTCGAGCTCCAAACCTTGATATTCTAACCTGTGTCAAAGATTCTCACATATGGGCAATCGAACATCCCACATATTCTGCTCTCACTAGGCCATTGTGTGAATTGACAACAGTTATTCCTCCACATGCTCTTGCTCCTAATAAGAAACTGAGGGTGTATTGTATGGTTGCACATACTTTGCAGCCACATCTTGTTGCTATTGGAACCAATATTGGTGTTGTTATCTGCGAGTTTGATGCTAGATCTCTTCCACCTGTTGCTCCCCTACCTACCCCATCAGATAGTAGAGAGCATTCTGCTGTATTTGTAATTGAAAGGGAGCTAAAGCTATTAAATTTTCAATTAAACAACTCTGTAAATCCATCCCTTGGTAGCTCCTTGGCAGAAACAGGCAGAGCTCAGGGAGATTCTTTTGAACCATTACCTGTCAAGCAGGGGAAGAAGCACATTAGTACACCTGTTCCTCATGATTCATACTCGGTTCTTTCTGTGAGCAGTTCAGGAAAGTATTTAGCAATTGTTTGGCCAGATATTCCTTATTTCTCTGTCTACAAGGTCAGCGATTGGTCAATTGTTGACTCTGGCAGTGCAAGGCTTCTCGCTTGGGATACTTGTCGTGACAGATTTGCTATACTGGAATCATCATTACCTCCTCGAATTCCTATAATTCCCAAAGGTAGTTCATCAAAAAGAGCAAAAGAAGCTGCTGCAGCGCAAGCAGCAGCAGCCGCAGCTGCTGCTGGTTCCTCAGCTTCTGTTCAAGTCCGAATCTTGTTAGATGACGGTACATCAAATATACTAATGAGGTCTGTTGGTGCTCGCAGTGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGAGTTGCCTATCGAACATCTAGGAGAATCAGTCCTATTGCTGCTACAGCTATTTCGACAATCCAGTCTATGCCATTATCCGGTTATGGAAGCAGCGGCCTTTCTTCTTTTACCACTTATGATGATGGATTTTCTTCACATAGATCTCCAGCTGAGGCAGCACCTCAAAACTTCCAGCTATACAGTTGGGAGACATTTCAACCTGTGGGTGCTCTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACCATCGAGTATTGTGCATTTGCATACCAACAATACATAGTCATATCTTCTTTGCGCCCACAATATAGATACTTGGGAGATGTTTCAATTCCATATGCTACTAGTGCTGTTTGGCACCGGAGGCAACTGTTTGTGGCAACACCAACTACTATAGAAGTTGTTTTTGTGGACGCTGGGGTTACACAAATTGACATCGAAACTAAAAAAATGAAAGAAGAGCAGAAATTGAGAGAAGCACAGTCAAGAGCAGTAGCAGAGCATGGAGAGTTAGCACTAATTACAGTTGAAGGCCCCCAATCTACTACCGAAGAAAGAATATCACTGAGACCACCAATGCTGCAGGTGGTTCGATTAGCTTCATTTCAGCATGCTCCTTCGGTGCCGCCTTTCCTATCGTTGCCAAAACAAACTAGAGTTGATGGTGACGAAGCAGATGAGAGAAGGGCAAGTGAAGTAGCAGTGGGTGGAGGGGGTGTGTCTGTGGCAGTTACTCGTTTTCCAACGGAGCAGAAACGTCCAGTTGGGCCTCTTGTTGTGGTGGGTGTCAAGGATGGAGTTCTATGGCTAATTGACAGGTACATGCGAGCTCACGCCTTATCCTTGAGTCATCCTGGTATTCGTTGCCGATGTCTTGCTGCTTATGGCGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGAAGAGAACACCATGATGATTTAGCACAATTTATGCTAGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCTGGAATATCAAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCAATGATTTGAAGAGAGCTCTTCATTGTCTTCTTACCATGAGTAACAGCCGGAATATTGGACACGATGGTACTGGACTTGGGTTGAATGACATTCTTAATTTAACAGATAAAAAACAAGATGTAGTTGAAGGTGTTCAGGGCATAGTGAAATTCGCAAAAGAGTTCTTGGATCTTATTGACGCTGCAGATGCTACAGCACAGGGTGAAATTGCCCGTGAAGCTCTGAAGCGATTAGCCGCAGCTGGATCCGTGAAAGGTGCATTACAAGGTCATGAGTTGAGGGGATTAGCATTGCGCCTTGCAAATCATGGAGAGTTGACTCGGCTAAGTGGTCTGATAAACAACCTAATCACGCTTGGCTTGGGACGGGAAGCTGCATTTTCTGCTGCTGTTTTGGGCGACAATGCTCTAATGGAGAAAGCATGGCAGGATACTGGAATGCTGGCTGAAGCTGTGCTTCATGCTCATGCACATGGACGTCCAACTCTGAAGAATTTGGTTCAGACCTGGAACCAAATGCTACAGAGAGAGGTTGAGCCTACTCCATCACAAAAGACAGATGCTACAGCTGCATTTCTAGCTTCTCTTGAGGAGCCTAAGCTTACGAGTTTGGCAGAAGCAGGGAAGAAACCACCGATTGAAATCCTACCTCCGGGAATGATGTCGCTTAATGCCCCTATCTCCATTCAGAAAAAACCAGCTTCTGCTGCTCAGAATTCCCAACCACAACCGGGAAAGCCATTGGCATTGGAAGCACCTCCTACAACCACAGCAGCGCCAGACAGTTCTACACAACAGCCTGAATCTACACCTGCATCTGCACCGGCACCAGTTAGTGATCCACCTCCATCAGATGGCACACCAACTCCTGAGGCCGCTCCACCTGAATCAAATTCGGGTGAAACCCCTGTAGATAATGGGGCTCCTACCCCAGCCTCAGCGAGTGCCGAAAATCCAAATGTTAATGGGGAAACTGTTCAGGAAGAACCTAAAAGTGATCCAACGCCTCCCGAGGCCCCATCACCAGTAGCAGAGGTTTCAGAGACTAACACTCCAAATCCGACAATAGTACCTGCAAGTGGCGACCCTTTCATATAA 3960 0.4588 MLRLKAFRPSTDKVVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETESRGKPTEAIRGGSVKQVNFYDDDVRFWQNWHNRSAAAEAPTAVHTSSFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLHCMEFLYRSGVGDGPLVAFGASDGVIRVLSMITWKLARRYTGGHKGTISCLRSFMAASGEALLVSGASDGLLIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTTVIPPHALAPNKKLRVYCMVAHTLQPHLVAIGTNIGVVICEFDARSLPPVAPLPTPSDSREHSAVFVIERELKLLNFQLNNSVNPSLGSSLAETGRAQGDSFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESSLPPRIPIIPKGSSSKRAKEAAAAQAAAAAAAAGSSASVQVRILLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRISPIAATAISTIQSMPLSGYGSSGLSSFTTYDDGFSSHRSPAEAAPQNFQLYSWETFQPVGALLPQPEWTAWDQTIEYCAFAYQQYIVISSLRPQYRYLGDVSIPYATSAVWHRRQLFVATPTTIEVVFVDAGVTQIDIETKKMKEEQKLREAQSRAVAEHGELALITVEGPQSTTEERISLRPPMLQVVRLASFQHAPSVPPFLSLPKQTRVDGDEADERRASEVAVGGGGVSVAVTRFPTEQKRPVGPLVVVGVKDGVLWLIDRYMRAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALHCLLTMSNSRNIGHDGTGLGLNDILNLTDKKQDVVEGVQGIVKFAKEFLDLIDAADATAQGEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLINNLITLGLGREAAFSAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQTWNQMLQREVEPTPSQKTDATAAFLASLEEPKLTSLAEAGKKPPIEILPPGMMSLNAPISIQKKPASAAQNSQPQPGKPLALEAPPTTTAAPDSSTQQPESTPASAPAPVSDPPPSDGTPTPEAAPPESNSGETPVDNGAPTPASASAENPNVNGETVQEEPKSDPTPPEAPSPVAEVSETNTPNPTIVPASGDPFI* 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0386 1319 PANTHER BNAC07G49640D PROTEIN 1 1304 - -
Tpr6g0386 1319 MobiDBLite consensus disorder prediction 1206 1319 - -
Tpr6g0386 1319 MobiDBLite consensus disorder prediction 1210 1227 - -
Tpr6g0386 1319 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Tpr6g0386 1319 MobiDBLite consensus disorder prediction 1228 1244 - -
Tpr6g0386 1319 SMART WD40_4 250 292 IPR001680 GO:0005515
Tpr6g0386 1319 SMART WD40_4 198 241 IPR001680 GO:0005515
Tpr6g0386 1319 SMART WD40_4 1 39 IPR001680 GO:0005515
Tpr6g0386 1319 Gene3D - 3 350 IPR015943 GO:0005515
Tpr6g0386 1319 MobiDBLite consensus disorder prediction 1245 1283 - -
Tpr6g0386 1319 PANTHER TSET COMPLEX MEMBER TSTF 1 1304 - -
Tpr6g0386 1319 SUPERFAMILY WD40 repeat-like 7 507 IPR036322 GO:0005515
Tpr6g0386 1319 Gene3D - 897 1145 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0386 - - gmx:100777567 2249.55