Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0352 ATGGCAAGCATGGTGGCATTCCAACAGAATCAACTATCTTTCCCTCCTTTAGCTTCTTCTCTTTCTGATTTCACTGGAACAAGACTTCAAACTCATATTCAGTTGAAAAGAAGAACATGGCAGTCAAAAGGGGCTTTATGTGTAACAGCATCAAGCACAAAGAAAATCCTCATAATGGGAGGTACTAGATTCATTGGTGTGTTTTTGTCTAGACAACTTGTCAAAGAAGGTCATCAGGTAACTTTATTTACAAGAGGAAAAGCACCTATCACTCAACAATTGCCGGGTGAATCAGACACTGATTTTGCTGATTTTTCTTCCAAGATCTTGCATTTGAAAGGAGACAGGAAGGACTATGATTTTGTAAAATCAAGTCTCTCAGCAGAAGGATTTGATGTTGTTTATGACATTAATGGAAGAGAGGCAGAAGAAGTTGAGCCAATATTGGATGCTCTCCCTAATCTAGAACAGTTCATTTACTGCTCTTCTGCTGGTGTCTATCTCAAATCTGATTTATTACCTCACGCCGAGGTTGATGCAGTTGATCCTAAGAGCAGGCACAAGGGAAAGCTTGAAACTGAGAGCTTGTTGCAATCAAAGGATGTTAATTGGACTTCTATAAGGCCAGTTTATATCTATGGACCTTTGAATTACAACCCTGTTGAAGAATGGTTCTTCCACAGATTGAAAGCCGGTCGCCCAATTCCTATTCCCGGCTCAGGAATACAGATAACACAACTTGGCCATGTTAAGGATTTGGCGACAGCATTTTTGAAGGTTCTTGGAAATGATAAGGCCAGCAAGCAGATATTCAACATCTCAGGAGACAAATATGTCACATTTGATGGATTAGCAAAAGCATGTGCTAAGGCTGGTGGGTTCCCCGAGCCAGAGATCGTTCATTACAACCCTAAAGACTTCGATTTTGGGAAAAAGAAGTCATTTCCATTCCGCGACCAGCATTTCTTTGCATCAGTGGAGAAGGCAAAGAGTGTGCTTGGGTTGGAACCTGATTTTGGACTTGTAGAAGGTCTTACAGATTCGTATAACTTGGACTTCGGTAGAGGAACTTTCCGCAAAGAGGCTGATTTTTCAACAGATGATATAATTCTTGGCAAGAGTCTTGTTAATGTATGA 1137 0.4072 MASMVAFQQNQLSFPPLASSLSDFTGTRLQTHIQLKRRTWQSKGALCVTASSTKKILIMGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEVDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATAFLKVLGNDKASKQIFNISGDKYVTFDGLAKACAKAGGFPEPEIVHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVLGLEPDFGLVEGLTDSYNLDFGRGTFRKEADFSTDDIILGKSLVNV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0352 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 33 373 - -
Tpr6g0352 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 347 IPR036291 -
Tpr6g0352 378 Pfam NAD dependent epimerase/dehydratase family 56 273 IPR001509 -
Tpr6g0352 378 PANTHER CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA A, CHLOROPLASTIC 33 373 - -
Tpr6g0352 378 CDD SDR_a1 54 307 - -
Tpr6g0352 378 Gene3D - 51 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0352 Tpr-Chr6 2815052 2817890 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0352 - - lja:Lj1g3v4790750.1 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0352 6 2815052 2817890 Tpr6g0352 6 2815052 2817890 ECH