Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0320 ATGTATCATTGGAATAGTTTAAAGATGGTAATCCTTCTACTCTTTCTACTAATTACTGGTCTTGGTCCAGTAATCAATGCATCTCCCCTAAGTGCTTGTTCAAATTGTGGGGATTTTGCAGTTCCATATCCACTCAGCACTAGTGATAACTGTGGTGACAAAAGCTACAAAATTTACTGCAATAATGATAGCTTAGAGTTCTTGTCAGCAACAGGAACTTACTATAAGATCCTTAAAATTGACCCAAATGCAAACAAGCTTATACTTAAACCACCCATCATACTTAAAGACACTTGTTATTCTTCTGATCTTATTGATGGAGGCTTAGTACTAGATGAAAATTTACCCTTCAACATTTCTACATTTAACACTGTCATGCTTCTAAATTGCTCTATAGATATACTTCGATCTCCTCTTAACTGTTCTTCAAACAGTATTTGTAGACAGTTTGAGGAAAAAGTGGAGGAGGGAAATGGGTGTATGAACACCCTTTGTTGTCATTACTTAAAAGATTCAGCTATGAATTCTCATAAGATTAGACTCAGGTTTGGGAGTTGTACTGCTTACACTTGTTTGGTAGATTTTAAGGCTGATGATCCTTTTGAAACTTGGAATTATGGGATTGAGTTGCAATGGATTCCTCCTAAATATTAA 654 0.3532 MYHWNSLKMVILLLFLLITGLGPVINASPLSACSNCGDFAVPYPLSTSDNCGDKSYKIYCNNDSLEFLSATGTYYKILKIDPNANKLILKPPIILKDTCYSSDLIDGGLVLDENLPFNISTFNTVMLLNCSIDILRSPLNCSSNSICRQFEEKVEEGNGCMNTLCCHYLKDSAMNSHKIRLRFGSCTAYTCLVDFKADDPFETWNYGIELQWIPPKY* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0320 217 Pfam Wall-associated receptor kinase galacturonan-binding 33 88 IPR025287 GO:0030247
Tpr6g0320 217 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 12 215 - -
Tpr6g0320 217 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 12 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0320 Tpr-Chr6 2601922 2602816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0320 33 216 Receptor kinase-like Gene Family AT5G02070 37.173 2.65e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0320 - - cam:101515529 369.007