Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3305 ATGGAAGACAAGGATTCGGTTGCTAAAATGATGGACTCTACATCTTCAAAGATACAACAGCTGCAAAAGGCTTTTGCTGAGCTTGAAAGTTACCGAGCTGTTACTCTTAACATGAAATGGAAAGATCTAGAGGAACATTTTCAGGGGCTAGAGAAATCGTTGAAGAGGCGCTTTCGTGAACTGGAAGACCAAGAAAAATTGTTTGAAATCAAAACAAGGCAATCTCGTGAAATGTTGGAGAAACAGGAAGCAGCTGTTTTTGCTAAGGAGCAAGCCTCGCTGCAGAGGATTCAAAAGAAAAGAGATGCTTCTGTATTCAGCATTGTAAATGCTCGAAAAAAGCAAAGGAAGGTTTCATCGAAGGGTTTTGTCTTTAATGAGAGTCTAGGGACACCAGTTGTAGAAGAGAAACCTTTAGATGCTGCATCCACTGGGGCTGAATGCAACATAGAAAACGTGCAACTTTCTCCTGAAAATGTGGACTTGATGTCTTATCCAGAGTTGGTAAAGCTATGCAAAGAGTTGGATGCTGCCGGACTTCACAAATTTATATCTGACAACCGCAAGAACCTTGCTGCTGTAAGGGAGGAAATACCGCTTGCGTTAAGAGCTGCTCCTAATGCTGCCTCTCTAGTTTTAGATTCGTTGGAAGGATTTTATTGCACAGAAGTGTCAAGTCAGGATATAAAGAAAGATGCTAACTTGTTGGGTCTTCGCCGAACCAGTATCATGCTGTTGGAATGTCTAAGTGACTTCCTGACCAATTTGGGTTCTGTTTCGAATGTGATTTCCGAAGATATCAAGGATAGGGCAAAGGCAGTTGCTGAAGAGTGGAAACCGAGATTGGATGCTCTTGATATTGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCATTTTTGCAACTTCTAGCCAGTTTTGGTATTGCCTCTGATTTTAATGAGGAGTTATCCAGGCTGATTCCAATGGTGTCTAGGCGTCGCCAAACTGCTGATTTATGCCGGTGCCTTGGGTTGTCGGAGAAGATGCCTGGTGTGATTGAAGTTTTGGTAAACAATGGGCGGCAAATTGATGCTGTTAACTTGGCTTTTGCATTTAATCTTACTGAACAGTTTTCACCCATTCCTTTGCTGAAGTCTTACCTGAATGATGCTAAGAAAGCTTTTTCTCCAGTCAAGAGTGTTAACTCTTCTCCCACTGCACAGACTGAGGTTAATGAAAGGGAGCTGTTTGCCCTCAAGGCCATACTGAAGTGCATTGAAGAACATAAACTTGACGAGCAGTATCCTATGGATCCTCTTCAGAAACGAGTGATCCAACTTGAGAAGGCCAAGACTGACAAGAAGAGGGAAACTGAAGCGACAAAACCTCAACCCAAGAGACCCTGTGCTAATGGCGTGGGATATGGTCCTCGTGTCACTAACAATCCCTCTGACAGAACTCCATATGTTAGAGTTGTTGACAGGTACCCACAATATATGTATGACCGACCTTACTTGTACCATGGACCAACTGAAAATCACTGCACCCCTTTCGTGGGTTCTGCAAACTATAACATCTCTCCTAATCCTGGAACTTACTTTGGAAATGGCTACCAATATCAGGCACCCCAATATCAAGCTACATATCTTCACTAA 1638 0.4298 MEDKDSVAKMMDSTSSKIQQLQKAFAELESYRAVTLNMKWKDLEEHFQGLEKSLKRRFRELEDQEKLFEIKTRQSREMLEKQEAAVFAKEQASLQRIQKKRDASVFSIVNARKKQRKVSSKGFVFNESLGTPVVEEKPLDAASTGAECNIENVQLSPENVDLMSYPELVKLCKELDAAGLHKFISDNRKNLAAVREEIPLALRAAPNAASLVLDSLEGFYCTEVSSQDIKKDANLLGLRRTSIMLLECLSDFLTNLGSVSNVISEDIKDRAKAVAEEWKPRLDALDIDASNGNSLEAHAFLQLLASFGIASDFNEELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIEVLVNNGRQIDAVNLAFAFNLTEQFSPIPLLKSYLNDAKKAFSPVKSVNSSPTAQTEVNERELFALKAILKCIEEHKLDEQYPMDPLQKRVIQLEKAKTDKKRETEATKPQPKRPCANGVGYGPRVTNNPSDRTPYVRVVDRYPQYMYDRPYLYHGPTENHCTPFVGSANYNISPNPGTYFGNGYQYQAPQYQATYLH* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3305 545 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 4 545 - -
Tpr5g3305 545 PANTHER FRIGIDA-LIKE PROTEIN 4 545 - -
Tpr5g3305 545 MobiDBLite consensus disorder prediction 444 467 - -
Tpr5g3305 545 Pfam Frigida-like protein 164 452 IPR012474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3305 Tpr-Chr5 56115120 56121520 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3305 - - gmx:100806993 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3305 5 56115120 56121520 Tpr5g3305 5 56115120 56121520 ECH