Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3115 ATGCAGTTATGGAACAAAGCTCGAAGCTTCGCGGAAGAAACCGCGAAACGATCACAAGAAGAAATTTCCACCGGTGCTCACAAATTCACCGAAATCATAACTGAAACTACCAAGGAGATCGCTGCACAAGCTTCCATTCACTTGGCCGAACCTTCTTCCAACAAGGATGTCGATCTCCAAACCTTCGGCATCACTCATGAATTCAGAGAATTCGTCAAAGGAATCACCGTCACTACCTTCCGAGATTTCCCTCTTCAAGATGATACGGAATTGTCTGATGTTCCTGCAGTTTCAAATATTAGACAGGATCTAACCGAGTGGCAGGAAAAACATGCCAATCTTGTTCTTTCTACTGTCAAGGAGATTTCAAAATTGAGGTATGAGCTGTGTCCACGTGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCATATTGCACCCTATGAGAATCGGTACATTGAAGAGACTAAACTAAAATCATCCGAGAAAGTTAAAGGTCAAATAGTGAAGAAACCATTAGAAGTTGAATTAACCTCTAACCAAGAGGTTAAGGCAGTGAATAAAGAGACTAAAACATCAAATTCATCACGTCAGCAAGACTTGGATGCATTTCTTCTGGGAGATACAGGAAGCAGTGATGATGACCCAGATGACAACAGGGGTGGATTTGATGATGATTTAGAAAAACTGGTAAAAAGTTCGGATGATGATAAAGATAAATCATAG 744 0.3992 MQLWNKARSFAEETAKRSQEEISTGAHKFTEIITETTKEIAAQASIHLAEPSSNKDVDLQTFGITHEFREFVKGITVTTFRDFPLQDDTELSDVPAVSNIRQDLTEWQEKHANLVLSTVKEISKLRYELCPRVMKERKFWRIYFILVNNHIAPYENRYIEETKLKSSEKVKGQIVKKPLEVELTSNQEVKAVNKETKTSNSSRQQDLDAFLLGDTGSSDDDPDDNRGGFDDDLEKLVKSSDDDKDKS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3115 247 MobiDBLite consensus disorder prediction 190 208 - -
Tpr5g3115 247 PANTHER BSD DOMAIN-CONTAINING PROTEIN 51 243 - -
Tpr5g3115 247 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 45 - -
Tpr5g3115 247 PANTHER BSD DOMAIN PROTEIN 51 243 - -
Tpr5g3115 247 PANTHER BSD DOMAIN PROTEIN 1 45 - -
Tpr5g3115 247 SUPERFAMILY BSD domain-like 63 156 IPR035925 -
Tpr5g3115 247 MobiDBLite consensus disorder prediction 190 247 - -
Tpr5g3115 247 MobiDBLite consensus disorder prediction 219 247 - -
Tpr5g3115 247 Pfam BSD domain 106 151 IPR005607 -
Tpr5g3115 247 SMART wurzfinal6 99 151 IPR005607 -
Tpr5g3115 247 Gene3D BSD domain 78 162 IPR035925 -
Tpr5g3115 247 MobiDBLite consensus disorder prediction 1 23 - -
Tpr5g3115 247 ProSiteProfiles BSD domain profile. 106 151 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3115 Tpr-Chr5 53943301 53948808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3115 10 222 EF-hand Containing Proteins AT1G69030 45.217 2.23e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3115 - - mtr:MTR_4g110020 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3115 5 53943301 53948808 Tpr5g3115 5 53943301 53948808 ECH