Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3111 ATGGGTTGGGCAATAGCTCTACATGGCGGCGCCGGCGTCCCATATTCACTTCCACCGGAACGCCGTCAACCACGCGAAGAAGCCCTCCGTCACTGCCTCCAAATCGGTATCAAAGCTCTCAATTCCAAAATGACGCCTCTAGATGTCGTTGAACTTGTTGTTCGCGAGTTAGAGATCATTCCACACTTCAATGCAGGAAGAGGTTCTGTTCTCACCAACAAAGGTACAATTGAAATGGAAGCTTCTATAATGGATGGTAATACTATGAAATGTGGTGCTGTTTCTGGTCTTACTACTGTTGTTAATGCTGTTTCGTTGGCTCGTTTGGTTATGGAGAATACTCCTCACATTTATTTGGCATTTGATGGAGCTGAGGAATTTGCTAGACAACAAGGAGTTGAGACTGTAGATTCAAGCCATTTCATTACTGAAGAAAATATTGAAAGACTAAATCAGGCAAAAGAAGCAAATAGGGTCCAGATTGATTATACCCAACCCATCTATAATGATACTAAGAGTGGAACAGAAACACCATTTGCTAATGGTGATAGTCAAACTGGAACTGTTGGATGTGTAGCTGTTGATAGTAATGGGAATCTAGCTTCTGCAACATCAACTGGTGGATTAGTGAACAAAATGGTCGGTAGAATCGGCGACACATCAGTCATTGGTGCTGGAACATATGCCAATGAACTTTGTGCAGTTTCTGCAACAGGAGTAGGCGAAGTAATAATTCGCGGGACAGTAGCAAGAGATGTGGCAGCATTGATGGAATTCAAACGCCTTTCTCTGAAAGAAGCTGCTAATATTGTTATACACGAGCGCACACCAAAGGGTACCGTTGGTTTGGTTGCTGTTTCTGCTGCAGGAGATATTGCAATGCCTTATAACACACCAGGCATGTTTAGAGCTTCTGCTACTGAAGATGGGTATTCTGAGGTTGCAATTTGGTCAGAACCCATAATTGAATGA 972 0.4311 MGWAIALHGGAGVPYSLPPERRQPREEALRHCLQIGIKALNSKMTPLDVVELVVRELEIIPHFNAGRGSVLTNKGTIEMEASIMDGNTMKCGAVSGLTTVVNAVSLARLVMENTPHIYLAFDGAEEFARQQGVETVDSSHFITEENIERLNQAKEANRVQIDYTQPIYNDTKSGTETPFANGDSQTGTVGCVAVDSNGNLASATSTGGLVNKMVGRIGDTSVIGAGTYANELCAVSATGVGEVIIRGTVARDVAALMEFKRLSLKEAANIVIHERTPKGTVGLVAVSAAGDIAMPYNTPGMFRASATEDGYSEVAIWSEPIIE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3111 323 CDD Asparaginase_2 4 310 - -
Tpr5g3111 323 Pfam Asparaginase 3 317 IPR000246 GO:0016787
Tpr5g3111 323 PANTHER L-ASPARAGINASE 1 317 IPR000246 GO:0016787
Tpr5g3111 323 Gene3D (Glycosyl)asparaginase 188 319 - -
Tpr5g3111 323 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 21 319 IPR029055 -
Tpr5g3111 323 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3111 Tpr-Chr5 53896914 53899671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3111 5 299 Miscellaneous Gene Families AT4G00590 25.610 6.89e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3111 K13051 - gmx:100799400 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3111 5 53896914 53899671 Tpr5g3111 5 53896914 53899671 ECH