Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3110 ATGCGACGACGGGCAGCCGATTATCGGCGCCCGGTTAGACGGAGGTTATCTTATTGGATCTGCCTTCTCTTCTCTTTCTTCTTTATTCTCGCTTCTGTTTCTGTTTTATTCATCATTCAACATAATCATCATCATCATCAAGATCCACCGCTTCCATATTCTTTGCTCGAGAGAAATGCAAGAGTTGAACATTTTGCCAAAGAAAGTTTGAATTTTACCGAAGAAATTTTAAGTGTAGCGTCATTTTCTCGGCAATTAGCGCAACAAATGATTCTGGCGAAGGCTTATGTGGTTATTGCCAAAGAACACAATAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATTAGAAGTTGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGGGAGCCTGTCACACTGGAAGAAGCAGAGCCAATTATTAAAAGCCTTACTGCTCTAATTTTTAAGGCACAAGATATCCATTATGACATTGCAACTACAATAGTGACTATGAAATCTCATATTCTTGCTCTTGAAGAGCGTGCCAATGCAGCAACAGTTCAAAGCGCCGTGTTTGGTCAACTAGCAGCTGAAGCGCTGCCCAAGAGTCTCCATTGTCTGAATGTGAAACTTGTGTCGGACTGGCTAAAGATGCCATCCCTACAGGAACTCTCAGATGAGAGGAAAAATTCCCCAAGGCTCACAGACAACAACCTATATCATTTCTGCATATTTTCAGATAATGTACTGGCAACATCTGTAGTTGTTAACTCAACCGTCTACAATGCTGATCATCCAAAGCAGTTGGTCTTTCACATTGTCACCAATGGAATCAATTACGGAGCAATGCAAGCATGGTTTCTTAGTAATGACTTTAAAGGGGCCACCATAGAGGTACAGAACATTGAGGAATTTCTTTGGTTGAATGCATCTTATTCTCCAACTGTCAAGCAGCTCCAAAATCCTGACTCACAAACTTTCTACTTTGGGCTGTATCAAGATGTAAGCGCTGATCCAAAAATGCGGAATCCTAAGTATTTGTATTTATTGAATCATCTTCGGTTTTATATCCCCGAGATTTATCCCCAACTTGAGAAGGTTGTTTTCCTGGACGACGATCTTGTTGTGCAGAAAGATCTGACCCCTCTTTTCTCACTGGATTTGCATGGGAATGTGAACGGTGCAGTTGAAACTTGTCTTGAAGCATTTCATCGGTACTACAAGTATTTAAACTTCTCAAACTCAATTATAAGCTCGAGGTTTGATCCACAGGCATGCGCGTGGGCGTTTGGTATGAACGTTTTTGACTTGGTGGCATGGAGGAAGGCTAATGTGACTGCAAGATATCACTATTGGCAGGAGCAGAATGCTGATGGGACACTCTGGAAGTTGGGGACACTTCCTCCTGCTCTTCTGTGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTCTAGGATTGGGCTATGACCTAAATATTGACAACCGCCTTATTGAAAGTGCGGCAGTTATTCACTTCAATGGGAACATGAAGCCGTGGCTGAAGGTAGCTATAGGCAGGTATAAGCCACTGTGGGACAAGTACATAAATCAAAGTCTCCCTCATCTTCAAAATTGTGTCCTGAGTTGA 1623 0.4239 MRRRAADYRRPVRRRLSYWICLLFSFFFILASVSVLFIIQHNHHHHQDPPLPYSLLERNARVEHFAKESLNFTEEILSVASFSRQLAQQMILAKAYVVIAKEHNNLHLAWQLSSKIRSCQLLLSKAAMTGEPVTLEEAEPIIKSLTALIFKAQDIHYDIATTIVTMKSHILALEERANAATVQSAVFGQLAAEALPKSLHCLNVKLVSDWLKMPSLQELSDERKNSPRLTDNNLYHFCIFSDNVLATSVVVNSTVYNADHPKQLVFHIVTNGINYGAMQAWFLSNDFKGATIEVQNIEEFLWLNASYSPTVKQLQNPDSQTFYFGLYQDVSADPKMRNPKYLYLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSRFDPQACAWAFGMNVFDLVAWRKANVTARYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKVAIGRYKPLWDKYINQSLPHLQNCVLS* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3110 540 CDD GT8_like_1 235 528 - -
Tpr5g3110 540 Pfam Glycosyl transferase family 8 239 513 IPR002495 GO:0016757
Tpr5g3110 540 PANTHER HEXOSYLTRANSFERASE 3 540 - -
Tpr5g3110 540 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 540 IPR029993 GO:0047262
Tpr5g3110 540 SUPERFAMILY Nucleotide-diphospho-sugar transferases 235 538 IPR029044 -
Tpr5g3110 540 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 536 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3110 Tpr-Chr5 53891359 53894903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3110 1 537 Glycosyltransferase AT2G20810 54.982 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3110 K13648 - gmx:100798878 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3110 5 53891359 53894903 Tpr5g3110 5 53891359 53894903 ECH