Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3109 ATGAAGCTGGCATTCTTCAATTTTGATCCCCAAAAATGTGTGTATAAAAATTTATATATATACACATATAGTTTGAGCTTAAGTCATAATTTAATTAGAATTAAAATAAAAATGGTTAGGCCACGTTTCAAGTTACATAATTTGTGTATTGGTCATGTTGCTACACCTCGTGTTAGAGCTTGTTCTACATCATCATCATCTTCTTTTGGATCAAAATTTGCAAATAGAACTGAGTTTTCAAGCAATGGAGTTCAAGATTCTAGCAAAGATAACAAAGGTGATGAAAGTGGCAATAAAGTAATGGTGGTTGTGGATTCTAGCTTTGAAGCTAAAGGAGCACTTGATTGGGCACTTTCACATACTATTCAGAAACAAGATACTGTTGTTCTTGTTCATGTAGCTAGACCCCTTAGAGAAGGTGGTGAGTCTGATGTGAAGTTTAATGTGAAGGCTTATCAACTTCTCTTAGATATGAAGAGTATGTGTGAAATGAAGAAACCTGGGGTGGTAGTGAATATAGTATTACTTGAAGGAGAAGAAAAGGGTGCTGCAATAGTGCAAGAGGCAAAGCAACAAAGGGTGTCTTTATTGGTGGTAGGACAAAGAAAACGTTCTATCTTGTGGTGCTTGGTGAGGAAATGGACAAGAAAAAGAAGAACAAAAAGTGGAATTGCTGAGTATTGTATACAAAACTCACCATGTATGACCATTGCAGTGAGAAGGAAGAATAAGAAACTTGGAGGATATTTGATTACTACCAAACGCCATAAAAACTTTTGGCTTTTGGCTTAG 792 0.3573 MKLAFFNFDPQKCVYKNLYIYTYSLSLSHNLIRIKIKMVRPRFKLHNLCIGHVATPRVRACSTSSSSSFGSKFANRTEFSSNGVQDSSKDNKGDESGNKVMVVVDSSFEAKGALDWALSHTIQKQDTVVLVHVARPLREGGESDVKFNVKAYQLLLDMKSMCEMKKPGVVVNIVLLEGEEKGAAIVQEAKQQRVSLLVVGQRKRSILWCLVRKWTRKRRTKSGIAEYCIQNSPCMTIAVRRKNKKLGGYLITTKRHKNFWLLA* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3109 263 Pfam Universal stress protein family 99 240 IPR006016 -
Tpr5g3109 263 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 98 243 - -
Tpr5g3109 263 Gene3D HUPs 97 248 IPR014729 -
Tpr5g3109 263 CDD USP_Like 99 239 - -
Tpr5g3109 263 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 22 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3109 Tpr-Chr5 53888064 53889909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3109 92 205 Receptor kinase-like Gene Family AT1G17540 27.119 3.36e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3109 - - gmx:100527308 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3109 5 53888064 53889909 Tpr5g3109 5 53888064 53889909 ECH