Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3103 ATGAGGTGGGAAAAAGTTGAGGTTAAGCCGATTGGAAAAGAGGGTGATGGAGGGCCAGGGAAAAGGTGGGGTCATACCTGTAACTCCATTAATGGTGGTAGACATATCTATGTCTTTGGTGGTTATGGCAAAGATAACTGTCAGACCAACCAAGTTCATGTCTTTGACACTGTGAACCAGACATGGAGCCAACCTGCAATAAAAGGCACTCCTCCTACTCCAAGGGACAGTCACACTTGCAGTGTTGTTGGTGATAGACTATTTGTGTTTGGGGGTACTGATGGAATGAATCCACTGAAGGATTTGCATATTTTAGACACTTCTTTGCAAATGTGGGAATGTCCAATTATAAGAGGAGATGGGCCAGAGGCTCGTGAGGGTCATAGTGCAGCAGTTGTTGGCCAACGACTCTTCATCTTTGGTGGCTGTGGAAAATCTGCTGATAATAACAGTGAGGTCTACTACAATGATCTTTACATACTGAATACAGAGACGCTTGTTTGGATGCGCCCTACAACATCAGGCACACCGCCATCACCTCGTGATAGCCACACTTTCTCAGCGTGGAAGAACAAAATTATTGTGATAGGGGGTGAAGACGGGCATGATTATTATTTGTCTGACGTCCATATCCTTGACACTGATACTCTAATTTGGAGGGAGCTGAGTACATCGGGCCAACTGTTGCCACCTCGGGCCGGTCATTCCACTGTTTCTCTTGGCAAGAACTTGTTTGTTTTTGGTGGATTTACAGACGCCCAAAATCTATACAACGACCTTTATATGCTTGATACTGATACTGGTGTTTGGACAAACGTTACACCTACAACCAATTGTCCTTCTGCTAGATTTTCTGTAGCCGGTGACTGTTTAGACCCATTTAAGGGTGGCGTTCTTGTGTTTATCGGCGGTTGTAACAAGAGTCTTGAAGCCCTGGAGGATATGTATTACCTACATACAGGTTTTGGGGAAAGTGAACTGAGACCAGATAAGTTATCTATGAAGAAGCAATTGAAGCTGAAATGCCAAGAAGAACAAAATCTCAGTCCTGGCCAAAATCAAGTTATGGCTGGATATGGAGTGGGTACTAACATTGGCCAGGCCATGACTGCGTTGAATTATAGCCAGCCAAATAGACCAAATATCCCGGCAAATCAATCAATTTCTCCTCATGGAAAGAAAACATTTGAAGCCAAGGTTACTGAAAATATCTCAGAAGGATATACTATTGAAACTGTCATTGATGGAAAGCCTCTTCGTGGAATTCTGTTTTTAAACAAACAAAACACTCTTCACCCATCCGCTCATGTTATCAATAGGAAAAGGACTGCTGGTGAAATTGATGGTGTCATCTCAAATGGCGCACATTCTAACATTAAGACTGCTAAAGTGAATCCAATGGAAAATAGACATCCGGAACCTCTCCAACACAGTTCTGAAGCTGTTGTTGCACTTGCAGCAAGCAATCCAATAACTGCCAATGCCGCTGTTAACCATAAGGTTTATACCAACCCAGAACCAGAAGCTGCTTCTTTGAATCGAAATGCTGAAAAAAATGAAACACCAACCTTGGGGGGTAACTTGAAAAATGATGGAGCAAGTGATGCGACAAGTTCCAGAGGTGAAGCCCAAACAAATGTTCAAACAAACGTGCTGATTTCCAACTTAGAAGCTTCAAGGCATGATAAAAATAGTGATGCATCAAACTGGAACACACAATTTCTGAAACCTATCACAGCTGAGAGTCCTATGAATTTGTCAAATCAAGGTGCAGTGGTGGATTCTACAACTCCAAGGACAGGAGAATCCAGCGAACCAGCAAAACAATTTTAA 1833 0.4277 MRWEKVEVKPIGKEGDGGPGKRWGHTCNSINGGRHIYVFGGYGKDNCQTNQVHVFDTVNQTWSQPAIKGTPPTPRDSHTCSVVGDRLFVFGGTDGMNPLKDLHILDTSLQMWECPIIRGDGPEAREGHSAAVVGQRLFIFGGCGKSADNNSEVYYNDLYILNTETLVWMRPTTSGTPPSPRDSHTFSAWKNKIIVIGGEDGHDYYLSDVHILDTDTLIWRELSTSGQLLPPRAGHSTVSLGKNLFVFGGFTDAQNLYNDLYMLDTDTGVWTNVTPTTNCPSARFSVAGDCLDPFKGGVLVFIGGCNKSLEALEDMYYLHTGFGESELRPDKLSMKKQLKLKCQEEQNLSPGQNQVMAGYGVGTNIGQAMTALNYSQPNRPNIPANQSISPHGKKTFEAKVTENISEGYTIETVIDGKPLRGILFLNKQNTLHPSAHVINRKRTAGEIDGVISNGAHSNIKTAKVNPMENRHPEPLQHSSEAVVALAASNPITANAAVNHKVYTNPEPEAASLNRNAEKNETPTLGGNLKNDGASDATSSRGEAQTNVQTNVLISNLEASRHDKNSDASNWNTQFLKPITAESPMNLSNQGAVVDSTTPRTGESSEPAKQF* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3103 610 MobiDBLite consensus disorder prediction 1 20 - -
Tpr5g3103 610 Pfam Kelch motif 122 165 - -
Tpr5g3103 610 MobiDBLite consensus disorder prediction 519 558 - -
Tpr5g3103 610 SUPERFAMILY Galactose oxidase, central domain 17 223 IPR011043 -
Tpr5g3103 610 MobiDBLite consensus disorder prediction 519 610 - -
Tpr5g3103 610 SMART kelc_smart 35 85 IPR006652 GO:0005515
Tpr5g3103 610 SMART kelc_smart 86 135 IPR006652 GO:0005515
Tpr5g3103 610 SMART kelc_smart 192 242 IPR006652 GO:0005515
Tpr5g3103 610 SMART kelc_smart 243 289 IPR006652 GO:0005515
Tpr5g3103 610 PANTHER KELCH REPEAT DOMAIN 1 547 - -
Tpr5g3103 610 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 1 547 - -
Tpr5g3103 610 Pfam Galactose oxidase, central domain 180 225 - -
Tpr5g3103 610 Pfam Galactose oxidase, central domain 231 280 - -
Tpr5g3103 610 MobiDBLite consensus disorder prediction 565 610 - -
Tpr5g3103 610 Pfam Galactose oxidase, central domain 34 82 - -
Tpr5g3103 610 Gene3D - 172 329 IPR015915 GO:0005515
Tpr5g3103 610 Gene3D - 1 171 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3103 Tpr-Chr5 53826057 53832941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3103 49 308 Acyl Lipid Metabolism Gene Families AT3G05420 29.455 1.91e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3103 - - cam:101509662 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3103 5 53826057 53832941 Tpr5g3103 5 53826057 53832941 ECH