Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3094 ATGGTTTCATCATTCAGTTTCGCACCTTTTGTATTTCTATTGCTCGTGATTGGAGGCACGGCAAGGCCTTTTTATCCACTTCCTGGCAAAGGTGATGATGGAAGTAGGCGGCCTCTTCAAACTTTTCGCCCATATAACCTTGCACACAGGGGATCGAACGGAGAAATTCCTGAAGAAACTAGTCAGGCATACCTGAGAGCTATTGAGGAAGGTGCAGACTTCATTGAAACTGATATATTATCTTCCAAAGATGGTGTTCTTATATGTTTCCATGATGTTACCCTTGATAACACTACTGACATAGCAAAATACAAAGAGTTTGCTAATCGTAAAAGAACATACGAAGTCCAAGGGAACAATACCACTGGATTTTTCACTGTTGATTTCACGTTAAAGGAATTAAAGTCGTTGAGGGTAAATCAGAGGTTTAGCTTTAGGGATCCACAGTATAATGGAAAATTTCAAATAATCACTTTTGAAGAGTTCATTAACATAGCACTGGATGCACCCAGAGTTGTTGGAATATATCCTGAGATAAAAAATCCAGTACTTATCAACCAGTATGTGAAATGGTCGGATGGCAAAAGATTTGAGGACAAGTTTGTGGAAACACTTCAGAAATATGGATACAAGGGTTCATACCTGTCAAAAGATTGGTTGAAACAACCTGCATTTGTTCAGTCATTTGCTCCAACTTCACTTGTGTATATATCAAATAAAACGGAGTTGCCTAAGATTTTATTAATCGATGAAGTTGATATTCCAACACAAGACACTAATCAGTCATATTGGGAAATTACATCTGATACATACCTAGACTACATAAAGCAATATGTTGTAGGAATTGGACCTTGGAAGGATACTATAGTTCCTGTGGTTAACAATTATACGACAAATCCTTCCGATCTTGTTGCACGGGCACATGCTCGTAATCTGCAGGTGCATCCATACACTTACAGAAATGAGAACCAGTATTTGCATTTCAACTTTAGTCAAGATCCATACAACGAGTACGATTACTGGATCAACAAGATAGGAGTTGATGGTTTGTTTACAGATTTCACCGGCAGTCTTCATAATTTTCAGGAATGGACCTCCCCTAATCATCGAGATGACAAGATTGAATCCGAACTATTACATAAAATTGCTTTGTTGGTATCCCCTTATGAATGA 1173 0.3811 MVSSFSFAPFVFLLLVIGGTARPFYPLPGKGDDGSRRPLQTFRPYNLAHRGSNGEIPEETSQAYLRAIEEGADFIETDILSSKDGVLICFHDVTLDNTTDIAKYKEFANRKRTYEVQGNNTTGFFTVDFTLKELKSLRVNQRFSFRDPQYNGKFQIITFEEFINIALDAPRVVGIYPEIKNPVLINQYVKWSDGKRFEDKFVETLQKYGYKGSYLSKDWLKQPAFVQSFAPTSLVYISNKTELPKILLIDEVDIPTQDTNQSYWEITSDTYLDYIKQYVVGIGPWKDTIVPVVNNYTTNPSDLVARAHARNLQVHPYTYRNENQYLHFNFSQDPYNEYDYWINKIGVDGLFTDFTGSLHNFQEWTSPNHRDDKIESELLHKIALLVSPYE* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3094 390 CDD GDPD_ScGlpQ1_like 44 355 - -
Tpr5g3094 390 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
Tpr5g3094 390 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 2 389 - -
Tpr5g3094 390 SUPERFAMILY PLC-like phosphodiesterases 44 360 IPR017946 GO:0006629|GO:0008081
Tpr5g3094 390 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
Tpr5g3094 390 PANTHER OS01G0763600 PROTEIN 2 389 - -
Tpr5g3094 390 Gene3D Phosphatidylinositol (PI) phosphodiesterase 43 361 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3094 Tpr-Chr5 53748552 53752274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3094 9 389 Acyl Lipid Metabolism Gene Families AT1G74210 73.560 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3094 K01126 - gmx:100778145 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3094 5 53748552 53752274 Tpr5g3094 5 53748552 53752274 ECH