Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3091 ATGGCAGAAACTCAAAGAGCTTCATCTTCAACAACCGTTCTCGATACTTTAGGCGAAGAAATCGTTAGAATTATCACTCCCGTTTCAATCTGCATGTTCCTCGTTGTAATCTTAGTTTCAATTCTCAACACAAACGATTCACCAACCATTTCCACCATAGCCAACATAGCATACGATGAAACAACCTCAGATTCTTCCTGGGACAAATTCCTCGGTGCACTTCTAAATTCCTTATCATTCGTCGTTGTCGTAACTTTCGCCACTTTCTTTTTAGTTCTCCTCTTCTATTTCCGATGCATCACGTTCTTAAAACTGTACATGGCTTTTTCTTCATTTGTTGTATTAGGTTTTCTTGGTGGTGAAATTTGTTTGTTTTTGATTCAACATTTTAGTACTCCGATTGATTGTATTACGTTTTCTATTGTTTTGTGTAATTTTGCTGTTGTTGGTGTTTGTGCTGTTTTTATGTCGAAAATGGCTATTTTTGTTACACAAGGTTATTTGGTAATTATTGGAATATTGGTTGCTTATTGGTTTACTATGTTGCCTGAATGGACAACATGGGCTATGCTTGTTTCTATGGCTTTGTATGATCTTGCTGCTGTTTTGTTGCCTGTTGGGCCTTTGAGGCTTTTGGTTGAACTTGCAATATCAAGGGATGAAGAAATTCCGGCTTTGGTTTACGAGGCTAGGCCGGTGAGTAATGATAGTTTGGAACATGTTGCGGCTCGGAGGAGGTTATGGAGAGAGAGGAGGATTGAGAATTCAAATGTGATGGTAACTGACAATGGAAGTTCCGTGTTGGGTAGTAGTGGACTTAATGTTGAACAATCACACTCTAATTCAGATGTGAATGTTGTTCTTGGATCGAATACAAACGACAATACCCCGGATGGCGTAATTTTGGCTTCAGAAAATGCTTCGAATTTGAATTCTAGTAGCTCTTATGGTGCGTGTAATTTGATAAGAGCCGAAGAGGGGCGAGTGCAGGTTCGAGAAACCGATTCAGATCTTGTCACGCCCTTGATTGTTTGTGGACCGAATGTGCAGGTTCCTAGAGGAGAAGATGCGGGGTCGAATGAGAATTTGATGTTGGAGGGAATTGGATTGGCCTCGTCCGGTGCAATCAAGTTAGGACTTGGCGATTTTATCTTCTATAGTGTTTTGGTTGGCAGGGCTGCAATGTATGATTTTATGACAGTTTATGCATGTTATCTTGCAATTATTGCTGGTCTTGGCATAACTTTGATGCTTTTGGCTTTGTATCAGAAAGCCTTGCCTGCTCTACCTGTGTCGATAGCACTCGGTGTGTTGTTTTATTTCTTGACCAGGTTACTACTTGAAGTATTTGTAGTACAGTGTTCCTTGAATCTCTTGATGTTCTAA 1386 0.4019 MAETQRASSSTTVLDTLGEEIVRIITPVSICMFLVVILVSILNTNDSPTISTIANIAYDETTSDSSWDKFLGALLNSLSFVVVVTFATFFLVLLFYFRCITFLKLYMAFSSFVVLGFLGGEICLFLIQHFSTPIDCITFSIVLCNFAVVGVCAVFMSKMAIFVTQGYLVIIGILVAYWFTMLPEWTTWAMLVSMALYDLAAVLLPVGPLRLLVELAISRDEEIPALVYEARPVSNDSLEHVAARRRLWRERRIENSNVMVTDNGSSVLGSSGLNVEQSHSNSDVNVVLGSNTNDNTPDGVILASENASNLNSSSSYGACNLIRAEEGRVQVRETDSDLVTPLIVCGPNVQVPRGEDAGSNENLMLEGIGLASSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGITLMLLALYQKALPALPVSIALGVLFYFLTRLLLEVFVVQCSLNLLMF* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3091 461 Gene3D Presenilin 367 453 IPR042524 -
Tpr5g3091 461 PANTHER PRESENILIN 11 461 - -
Tpr5g3091 461 SMART psh_8 71 447 IPR006639 GO:0004190|GO:0016021
Tpr5g3091 461 Pfam Presenilin 18 451 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tpr5g3091 461 PRINTS Presenilin family signature 25 35 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tpr5g3091 461 PRINTS Presenilin family signature 181 188 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tpr5g3091 461 PRINTS Presenilin family signature 198 215 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tpr5g3091 461 PANTHER PRESENILIN 11 461 IPR001108 GO:0004190|GO:0016021|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3091 Tpr-Chr5 53727419 53729193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3091 1 461 Miscellaneous Gene Families AT2G29900 58.280 1.68e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3091 K04505 - gmx:100799643 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3091 5 53727419 53729193 Tpr5g3091 5 53727419 53729193 ECH