Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3085 ATGGCTGTTACTTTTGCTCTTACTCTTGCACTTCTTCTTTTACCCTTCACCGCCATTCCATCAAGTGCTAATTGGTGTGTTTGCAAAGATGGAGCTGATGCAATCTTGCAGAAAACATTGGACTATGCTTGTGGAGCTGGAGCTGATTGTAACCCTCTTCATCAAAACGCACCTTGTTTCCAACCAAACACTGTTAGAGCTCACTGCAGCTATGCTGTGAATAGCTTTTACCAAAAGAAGGGTCAAGCTCAAGGAACTTGTGACTTTGCAGGAACAGCCACTGTTGTTGCATCTGATCCAAGTGTTAGTGGCTGTGCCTACCCTTCAAGTGCCAGTGGTGCAGGCACTAGTACAACAACTCCAGTGTCAGGCACTACACCCTCCTTGGGAACCACTCCTTCCACCGGAACCCCGTCAACAAGTACCGGCACAGGCACAGGCACAGGCTCTGGCATGGGCACCAGTACCGGCACCGGCACTGGTTCTACTCCATACAGCACAACTCCTGGAGTATTAGGAGGTATAGGTACTGGTATGGGGCCATCTGGAGCTGGAGGAATGAATGATGATAGTCATGGTGGAATTAGACTTTTGGACACTAGTTTCTTATCAATCCCACTCTTTTCTGTCTTCATCATGTTTTGGTGGGGTTGA 654 0.4817 MAVTFALTLALLLLPFTAIPSSANWCVCKDGADAILQKTLDYACGAGADCNPLHQNAPCFQPNTVRAHCSYAVNSFYQKKGQAQGTCDFAGTATVVASDPSVSGCAYPSSASGAGTSTTTPVSGTTPSLGTTPSTGTPSTSTGTGTGTGSGMGTSTGTGTGSTPYSTTPGVLGGIGTGMGPSGAGGMNDDSHGGIRLLDTSFLSIPLFSVFIMFWWG* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3085 217 PANTHER BETA-1,3 GLUCANASE 1 205 IPR044788 -
Tpr5g3085 217 MobiDBLite consensus disorder prediction 116 166 - -
Tpr5g3085 217 Pfam X8 domain 25 94 IPR012946 -
Tpr5g3085 217 SMART X8_cls 24 107 IPR012946 -
Tpr5g3085 217 Gene3D - 19 117 - -
Tpr5g3085 217 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3085 Tpr-Chr5 53674872 53678874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3085 25 109 Glycoside Hydrolase AT2G05790 49.425 2.88e-22 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3085 - - gmx:100812033 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3085 5 53674872 53678874 Tpr5g3085 5 53674872 53678874 ECH