Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3078 ATGGATGATGACATAGATTTTGAGTTGTTTCTCCACACATGGAATACAAAGAATCCAACGGATCGTATTTTCATTGTATCTTTTTTTGTTGCTGCCCTGGTTGGAATTTTGACTATAGCCTATACGGCTTTTCAGTGGAGGAGAAACATTAATTTAAGTTGGATGAAAGCTATAGCTAGATCTAAGAAAAACCCAAAGGCAAAGCACAAAGTTCCTGCTGCCCCTCATACTTGGAGTCTAGAATCTGCATCTCGCGCAAAGAATTCAAACTGCTGTGTGTGTTTTAAGTCCATGTCGCCCTCTCAAACTCTAGGACCTATAGTAGCTTCAGACAGTTTTATCCACCGGTGCTGTATTTGTGGTGCGGTAGCTCATCTAAGTTGTTCTTCTAGTTCTCACAAGGACTGTAAGTGTGTTTCTATGACTGGATTTGAGCATGTCGTGCACCAGTGGGCAGTTCGTTGGACAGATGTAGCCGATCAACCTGATGAAACTACTTTCTGTAGTTACTGTGAAGAGCCATGTGGTGGGACCTTCCTCAGTGGTTCCCCTATATGGTATTGCCTGTGGTGCCAACGTTTAGTACATGTTGATTGTCATGGTTCAATGTCTAATGAAACGGGTGATATATGTGATTTGGGCCCTTTTAAAAGATTAATACTGTCTCCTCTGCATGTGAAGGAATTGAACAGGAACTTGGCAGGTGGTTTTCTTAGCTCAATTACACATGGTGCAAATGAGATAGCATCTTCAGTTCGGGCAAGTATTAGGAGCCAGGGTAAAAAGTATAAGCACGGAAATGAAACACTGGCTGAATCTGGGAATAGTGAGAGCACTAGTGAAATATCCACAGAAAGCACTGCGGATTCGCATCAAATAGCTAATGGACATAATGTAATGGAGGGAAAAAATAGTGTTGGCTCAAATAAAGAGGTGCAACATCAAGATAGTGAAGTGGATAGTAAGAATAAGATGGACAGAAAACCCAGTCTTACGCCCAGTACATCATCTATAAATCAGGAGGAGTCCCAGGTGTTAGGAGTGAAACAGAATTACGAGTTAACTGGTTTGCCTCCAGATGCAAGACCATTGTTAGTTTTTATAAACAAAAAGAGTGGTGCCCAGCGAGGAGACTCACTTAGGCTGCGTCTGAATATTCTTTTAAATCCTGTTCAGGTGTTTGAATTGAGCTCATCACAGGGGCCAGAGATGGGACTTTATTTGTTTAGAAAGGTGTCTCACTTCAGAGTTCTTGTATGTGGTGGAGATGGTACTGTTGGTTGGGTTCTGAATGCAATAGAAAAACAAAATTTTGATTCCCCTCCCCCAGTTGCTATTCTTCCTGCAGGTACTGGAAATGATCTTGCTAGAGTTCTCTCTTGGGGAGGTGGCTTGGGTCCAGTGGAAAGGCAAGGGGGTCTTACCACAATTCTGCATCATATAGAACATGCTGCGGTTACTATTCTTGACAGGTGGAAGGTAACAATCAGTAACCCACAAGGAAAGCAACAACTGCAACCACAAAAGTTTATGAACAATTATCTTGGAATTGGTTGTGATGCAAAGGTTGCTTTGGACATCCATAATCTGCGGGAGGAAAACCCAGAGAAGTTTTATAACCAGTTTATGAATAAAGTTCTATATGCAAGAGAAGGTGCTAAAAGCATAATGGATAGGACATTTGAGGATTTCCCTTGGCAGATTCGTGTTGTGGTGGATGGAGTTGAAGTTGAGGTACCTGAGGATGCTGAAGGGGTGCTTGTTGCAAACATTGGAAGCTACATGGGAGGTGTAGATTTATGGCAAAATGAGGATGAGAGTTATGATAATTTTGATCCACAATCTATGCATGACAAGATACTTGAAGTTGTGAGCATATCTGGAACATGGCACCTTGGGAAGCTTCAGGTTGGGCTTTCTAGAGCTCGAAGACTTGCGCAAGGACAGTCAATTAAGATAGAATTGTTTGCTAAGTTTCCTGTTCAAATTGATGGAGAACCTTGGTTTCAGGAGCCCTGTACAATTTCCGTAGCTCATCATGGCCAGGCCTTCATGTTAAAGCGGGCGGCTGAGGAACCTCTTGGTCATGCAGCTGCAATGATCACCGATGTGCTTGAGAATGCTGAAACCAATAATGTAATTAATGCTTCACAAAAGAGAGCTCTTCTTCATGAAATGGCACTCAGGCTGTCCTAG 2196 0.4244 MDDDIDFELFLHTWNTKNPTDRIFIVSFFVAALVGILTIAYTAFQWRRNINLSWMKAIARSKKNPKAKHKVPAAPHTWSLESASRAKNSNCCVCFKSMSPSQTLGPIVASDSFIHRCCICGAVAHLSCSSSSHKDCKCVSMTGFEHVVHQWAVRWTDVADQPDETTFCSYCEEPCGGTFLSGSPIWYCLWCQRLVHVDCHGSMSNETGDICDLGPFKRLILSPLHVKELNRNLAGGFLSSITHGANEIASSVRASIRSQGKKYKHGNETLAESGNSESTSEISTESTADSHQIANGHNVMEGKNSVGSNKEVQHQDSEVDSKNKMDRKPSLTPSTSSINQEESQVLGVKQNYELTGLPPDARPLLVFINKKSGAQRGDSLRLRLNILLNPVQVFELSSSQGPEMGLYLFRKVSHFRVLVCGGDGTVGWVLNAIEKQNFDSPPPVAILPAGTGNDLARVLSWGGGLGPVERQGGLTTILHHIEHAAVTILDRWKVTISNPQGKQQLQPQKFMNNYLGIGCDAKVALDIHNLREENPEKFYNQFMNKVLYAREGAKSIMDRTFEDFPWQIRVVVDGVEVEVPEDAEGVLVANIGSYMGGVDLWQNEDESYDNFDPQSMHDKILEVVSISGTWHLGKLQVGLSRARRLAQGQSIKIELFAKFPVQIDGEPWFQEPCTISVAHHGQAFMLKRAAEEPLGHAAAMITDVLENAETNNVINASQKRALLHEMALRLS* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3078 731 MobiDBLite consensus disorder prediction 257 342 - -
Tpr5g3078 731 Pfam Diacylglycerol kinase accessory domain 511 667 IPR000756 GO:0004143|GO:0007205
Tpr5g3078 731 SMART dagk_c4b_2 510 667 IPR000756 GO:0004143|GO:0007205
Tpr5g3078 731 PANTHER DIACYLGLYCEROL KINASE 15 731 IPR037607 GO:0004143|GO:0007165
Tpr5g3078 731 MobiDBLite consensus disorder prediction 269 312 - -
Tpr5g3078 731 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 359 498 IPR001206 GO:0016301
Tpr5g3078 731 Pfam Diacylglycerol kinase catalytic domain 363 463 IPR001206 GO:0016301
Tpr5g3078 731 Gene3D - 508 678 - -
Tpr5g3078 731 Pfam Phorbol esters/diacylglycerol binding domain (C1 domain) 149 209 IPR002219 -
Tpr5g3078 731 Gene3D - 147 207 - -
Tpr5g3078 731 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 148 211 IPR002219 -
Tpr5g3078 731 MobiDBLite consensus disorder prediction 328 342 - -
Tpr5g3078 731 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 360 685 IPR016064 -
Tpr5g3078 731 PANTHER DIACYLGLYCEROL KINASE 15 731 - -
Tpr5g3078 731 SMART dagk_c4a_7 363 492 IPR001206 GO:0016301
Tpr5g3078 731 MobiDBLite consensus disorder prediction 313 327 - -
Tpr5g3078 731 SMART c1_12 76 136 IPR002219 -
Tpr5g3078 731 SMART c1_12 149 211 IPR002219 -
Tpr5g3078 731 Gene3D - 360 493 IPR017438 -
Tpr5g3078 731 SUPERFAMILY Cysteine-rich domain 139 206 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3078 Tpr-Chr5 53616490 53623219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3078 1 731 Acyl Lipid Metabolism Gene Families AT5G07920 75.000 0.0 1141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3078 K00901 - gmx:100802426 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3078 5 53616490 53623219 Tpr5g3078 5 53616490 53623219 ECH