Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3065 ATGGTTGGTGGGATTGATACTACATCAATTGAACCTGTCCGGGTTGGCGTCTCTTTATTTGACGATAAAGGTGATTCGGATAAATTTCTTCCTGCAAGGAATAAGCGTGACTATGAAAAAGAGATTGAAGATTTGACAAAGGAATTGGACAACTACAAGACACAATTAGAAGCAAAGCATGTTGCACACATCAAAGCGCTTCTTAAGCCGGAACAAAACCAAAAGATGATTCATGAATTGTCTACATTGTTGAAAAACTCTGATATTGAAAGAAACAAGTACATGAATGAATGTTCGGAGGGTAAAGCTAGCAAAGACGAACTTGAATCAACGATGAAAGAGATGGCTGATCTTAAATTAGAAACTGCAAAACTCCGGGACCAGCTTTCACATGTTTTGGTTGAATTGAAGGCCTCACAAAGGGAGCTTCTTAACAAAGATACTGAGATTTTTGCTGCTAGAGATTCAGAATCGAACGCTGTCACTAAAGCGAAACAGTTGGAAAATGATTTGAAGTTGGAAAAGGAACTGAAAGAAGAACTTCTTCATCAAGTATTTGAGCTTAGTGAAATTATTCACAGGTCAAAACTTGCTGCTGTTAAAACTGAGAAACGAAATATCGGTATGTTGTATCAGAAAGACGAGAAAATTCAATTGGCTACACAAGATAATGATCAAGCACAACAGGAGATGGAAGATATGAGAAAGCATATAGATATTCTACATGGATTGCAAAACAAACAAATGGTTGATGAAGCACACATTTTGTCTGAGGATTCAAACTTGTTAAAGAATGACATTGAGCAAAAGGAAAGATATATGATGGATCAATCTGCTTATATTTATAGATTAGAATTGGAATTAAATCAGTTAAAAAATGAACTTTCAAGTGCAAAGGAGGAGATAAATGAATTGAATATTAGCATTGAATCGCTCATAAGTGAGTTGCGCAAGGCCAAAGATGAGTTGAAGATGAATAAGGAGAGAGACATTGAAGCAGAAGTGGAGATTGCATTGCTGAAATCTCATCTTCAAGAATGTAGGTCGGCTTACAAGAATGAATATGTCACTGATCACTCAAAGGGTGAAGCTGAAGAGAGGAATAGTGAGAAAAACAATGACAATATCACAATCTCTTTGGTTAAAGAAGCTGAAAAAGAAAATGGAAAAGGAAACCATTTAGAGTTAGCATTGATGAAAAAGGAGCTTGAAAATGCATCGTTGAAGATTTCAGAGATGAGAACTCGTGCAGAACAGGCTATGAGCCGAGCTGAGTTAGCTGAGAATGGTAAAGCAGCATTGGAGGAGAAAATAAGGAGACACCGTGAACATAGGCTGAGAAAGAAGGCGGCCCTAACCGCGCTTCGGGAGGAATCTACACCAAAACCGTTTACTCCTTCAACATCATATGGAACACCAAGTATACATCAGCCATTAGGTAAAGTTCTTAATATGAAGTTGTAA 1464 0.3736 MVGGIDTTSIEPVRVGVSLFDDKGDSDKFLPARNKRDYEKEIEDLTKELDNYKTQLEAKHVAHIKALLKPEQNQKMIHELSTLLKNSDIERNKYMNECSEGKASKDELESTMKEMADLKLETAKLRDQLSHVLVELKASQRELLNKDTEIFAARDSESNAVTKAKQLENDLKLEKELKEELLHQVFELSEIIHRSKLAAVKTEKRNIGMLYQKDEKIQLATQDNDQAQQEMEDMRKHIDILHGLQNKQMVDEAHILSEDSNLLKNDIEQKERYMMDQSAYIYRLELELNQLKNELSSAKEEINELNISIESLISELRKAKDELKMNKERDIEAEVEIALLKSHLQECRSAYKNEYVTDHSKGEAEERNSEKNNDNITISLVKEAEKENGKGNHLELALMKKELENASLKISEMRTRAEQAMSRAELAENGKAALEEKIRRHREHRLRKKAALTALREESTPKPFTPSTSYGTPSIHQPLGKVLNMKL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3065 487 PANTHER EXPRESSED PROTEIN 3 365 - -
Tpr5g3065 487 PANTHER EXPRESSED PROTEIN 361 486 - -
Tpr5g3065 487 Pfam Weak chloroplast movement under blue light 5 352 IPR008545 -
Tpr5g3065 487 Coils Coil 164 184 - -
Tpr5g3065 487 Coils Coil 108 128 - -
Tpr5g3065 487 Coils Coil 281 333 - -
Tpr5g3065 487 Coils Coil 396 444 - -
Tpr5g3065 487 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 365 - -
Tpr5g3065 487 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 361 486 - -
Tpr5g3065 487 Coils Coil 35 62 - -
Tpr5g3065 487 Coils Coil 210 237 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3065 - - cam:101496589 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3065 5 53524499 53526887 Tpr5g3065 5 53524499 53526887 ECH