Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3064 ATGGATAAAGCTCTGACTAAACTTGGTAGCTATTGGGTCTCCAAGAAAGCTAAAGAAGAGTTTTCCAACATAACCAACGACCTATCTTCTCTCTCAAATACTGTTGAAGACAAGGCAAAACTTTTCATCAACAAGCTCAAAGGCAAAACTCAGAAATCTTTACCAGATCTCCTTAAAGAGCACAACCTTCCTCCGGGTCTGTTTCCGCGTAACATAACATGCTACGAGTTTGATGAATCAAAAGGAAAGTTGATAGTGCATTTGTCCTCCCCTTGTGAGGTATGCTTCAAGGACTCATCCATTGTGAGATATTCAAACCGTGTCAAAGGAACATTGTCAAAGGGGAAACTCATTGTTGTAGATGGAATGAAGACCAAAGTTCTTGTTTGGGTTAAGGTCACTAGTGTTTATGTTGAGAGTTATAAATCTGACAAAGTATGGTTCACTACCACTGGTGTTAAAAAATCAAGGTCTAAAGATGCTTATGAAATGCCTCGTGATGCTGTTAAGGTGGAAGATTATTGA 525 0.3905 MDKALTKLGSYWVSKKAKEEFSNITNDLSSLSNTVEDKAKLFINKLKGKTQKSLPDLLKEHNLPPGLFPRNITCYEFDESKGKLIVHLSSPCEVCFKDSSIVRYSNRVKGTLSKGKLIVVDGMKTKVLVWVKVTSVYVESYKSDKVWFTTTGVKKSRSKDAYEMPRDAVKVEDY* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3064 174 SUPERFAMILY At5g01610-like 3 172 IPR036758 -
Tpr5g3064 174 Pfam Protein of unknown function, DUF538 56 163 IPR007493 -
Tpr5g3064 174 PANTHER T31J12.3 PROTEIN-RELATED 3 174 IPR007493 -
Tpr5g3064 174 Gene3D - 32 174 IPR036758 -
Tpr5g3064 174 PANTHER DUF538 FAMILY PROTEIN 3 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3064 Tpr-Chr5 53518986 53520971 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3064 - - gmx:100776470 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3064 5 53518986 53520971 Tpr5g3064 5 53518986 53520971 ECH