Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3062 ATGACTTCCTCGCCGCACCGTTCCGGCGGCGAAGGCGACGCTAACGCTGATAAAAGGCCGAGATTTTTCGACACAAAGACAAAAAACATCTGTTGGGCAAAGGCTGACACTGTTCCCGGCCGTCACCCAGAAAGGTGGCGCAAAGACGCCGCCGGTAACATTGTCTGTAAACGTTTCTTCAACTGCCTTGGCTGTCTCTGCTACGAGTACGATCACATCATCCCTTATTCCAAAGGGGGTGAATCAACAGCCGATAATTGCCAAATACTTCAATCAAGAGTGAACAGATTAAAATCAAACAAAGATCAGATTGATTCGGATAAGTTGAGAGGCTACTCTTGTGATATTAATTTTACTGAAAAGGAGCTCGACATAATTGAGATGGCTGTTTATGGCGATGTAATCCGGCCAGGAAACCAGTGTAGATGCAGAACTATTGATGAAATGCTTGGAAAATACAAGGCCAAAGACAACACAAATGCATGCAAGTTACCATAG 498 0.4498 MTSSPHRSGGEGDANADKRPRFFDTKTKNICWAKADTVPGRHPERWRKDAAGNIVCKRFFNCLGCLCYEYDHIIPYSKGGESTADNCQILQSRVNRLKSNKDQIDSDKLRGYSCDINFTEKELDIIEMAVYGDVIRPGNQCRCRTIDEMLGKYKAKDNTNACKLP* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3062 165 Pfam HNH endonuclease 67 100 IPR002711 GO:0003676|GO:0004519
Tpr5g3062 165 PANTHER F6A14.21 PROTEIN 13 165 - -
Tpr5g3062 165 CDD HNHc 57 99 IPR003615 -
Tpr5g3062 165 SMART HNH_5 50 96 IPR003615 -
Tpr5g3062 165 Gene3D - 25 116 - -
Tpr5g3062 165 PANTHER HNH ENDONUCLEASE 13 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3062 Tpr-Chr5 53511988 53514809 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3062 - - lang:109344321 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3062 5 53511988 53514809 Tpr5g3062 5 53511988 53514809 ECH