Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3050 ATGGGTTCTCTTCCTCTCAGCGATGATCGATCGGAGATTGTGTTCTTCGACGTAGAAACCACCGTTCCGACCAGAACCGGTCAGGGTTTTGCAATTTTAGAATTCGGAGCAATTCTGGTGTGTCCAAGGAAACTGACAGAGCTTCGAAACTACTCAACTTTGGTTCGACCCGCCGACCTTTCGCTCATTTCTCCGTTATCAGAGCGATGTAACGGAATCAACGCCGAAGCTGTTTCCAATGCGCCTACTTTCGCTGATATTGCCCCTGCTGTCTACGATCTTCTTCACGGGAGGATTTGGGCGGGTCATAATATCTTAAGATTTGATTGTGTGCGGGTTAGAGATGCTTTTGCCGCGATTAACCTGACACCGCCTGAACCTAAGGGTACAATTGATTCTTTGGTTTTGTTGACTCAAAAGTTTGGAAGAAGAGCTGGTAACATGAAGATGGCTACTCTTGCTACCTATTTTGGTCTTGGACAGCAGACACACAGGAGCTTAGATGATGTTCGAATGAATCTTGAAGTTCTCAAATACTGTGCAACAGTTCTATTCTTGGAATCAAGTCTCCCAGATATATTCACTGAAAATTGTTGGGTTTCACCAAATGCTGTTACAAGAAGTCGCAGTAATGGGAAATCTCGACCCGAAGGGGGTTTGTCAAATATGAATCAGGATTCTGTGTTGGTATCATCTCCTGAAACTATAGATAAAAATCATCCAATCCTTTCTCTTGCAACAAGCAACACAAAATTGGTTGTCTCAAATGTTGCACATTCTAGTACAGCTCAATCAGATCCTTTTAGCTTTCGTGATCTTCAGGATGAAATTAATAGAGAATCCATTACGAAAGATGTTGCCATGGATGAAAAACCCATGCAACCTGATTCATCGGCCTCTTCTTCTGTGCCTCAGGCTTGTAGCAGCTCTATTGCCATTTTAGAGCCAGAAAAAATATGTATTTCTTCTATCGATGTATCTCTTGTTCCATTTTATCGGGGCAGTCAAAGGATAGAATTGCATCATGAAGGCTTTCCATTTCAGCTTCATTGTTCTGGTTTGAAAGTGCGGTTTGGAATAAGCACAAAATTTGTTGATAGTGCTGGTCGGCCACGGTTAAACTTTGTGGTCGATCCATCACCAAGTTTATGTAATGTTCTTGATGCATGTGACAATGTTGCACGTAAGTTATCCTCAGAATCTGGTAGCGGCTCTGATTGGAGGCCAGTTGTTATTAGGAAAGAGGGCTTCTTCAACTATCCTACTATCAGATTACATATACCTACAGCAATATGTGAAGAGATCGCCATTTACGCAACAGAAATATATCAAAAAGAATCATCTGGGTCTGTGCAAAGGCTTCTTTTCAGCAAGTTCGACGCTGCAGAACTTGATTCCTTGTTCAAGCCTGGGACATTTGTTGATGCAGTCTTCTCCTTGGATCCGTATGACTATCATCAGAATGCAGGGATTAAATTAGTTGCCAAGAAATTGATCATTCATTGCATGTAG 1512 0.4206 MGSLPLSDDRSEIVFFDVETTVPTRTGQGFAILEFGAILVCPRKLTELRNYSTLVRPADLSLISPLSERCNGINAEAVSNAPTFADIAPAVYDLLHGRIWAGHNILRFDCVRVRDAFAAINLTPPEPKGTIDSLVLLTQKFGRRAGNMKMATLATYFGLGQQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTENCWVSPNAVTRSRSNGKSRPEGGLSNMNQDSVLVSSPETIDKNHPILSLATSNTKLVVSNVAHSSTAQSDPFSFRDLQDEINRESITKDVAMDEKPMQPDSSASSSVPQACSSSIAILEPEKICISSIDVSLVPFYRGSQRIELHHEGFPFQLHCSGLKVRFGISTKFVDSAGRPRLNFVVDPSPSLCNVLDACDNVARKLSSESGSGSDWRPVVIRKEGFFNYPTIRLHIPTAICEEIAIYATEIYQKESSGSVQRLLFSKFDAAELDSLFKPGTFVDAVFSLDPYDYHQNAGIKLVAKKLIIHCM* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3050 503 Pfam Exonuclease 14 177 IPR013520 -
Tpr5g3050 503 SMART exoiiiendus 12 186 IPR013520 -
Tpr5g3050 503 PANTHER PROTEIN NEN3 6 502 - -
Tpr5g3050 503 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 6 502 - -
Tpr5g3050 503 Gene3D - 5 183 IPR036397 GO:0003676
Tpr5g3050 503 SUPERFAMILY Ribonuclease H-like 11 182 IPR012337 -
Tpr5g3050 503 CDD DEDDh 14 178 - -
Tpr5g3050 503 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3050 Tpr-Chr5 53409361 53412263 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3050 - - ccaj:109808157 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3050 5 53409361 53412263 Tpr5g3050 5 53409361 53412263 ECH