Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3045 ATGTCGAGAAAGTCAATTGAAATTTTAGACGATTGCATGGAAGGGGAAAAGCAGAAAAATGTCCAAAAACGTGCAGATGACTCAAGTTTGCTTATTCCTCCGCTCAGTCATGATACCTCAGTCAATTGTCTTGCTCGATTGTCAAGGTCTGATTATGGCTCAATTGCTGTATTGAACCGAAGTTTTCGATCACTCGTTAAGAATGGAGAATTGTATCAACTTCGACGAAAAATGGGCATAATTGAACATTGGGTTTACTTTTCTTGTGATGTCCTTAAGTGGGAGGCGTTTGATCCAAATCGTGATCGGTTGATGCAATTGCCTAAAATGAGTTCCAATACATGTTTCATGCTTTCAGACAAGGAGTCATTAGCTGTTGGTACAGAGCTTCTTGTTTTTGGAAGGGAAATAACAGGTCCTGCCATCTATAAGTATAGCATTTTGACAAATTCATGGTTGAAGGGAATGAAAATGAATACTTCGAGATGTTTGTTTGGTTCTGCAAGCCTCGGAGAAATAGCAATATTAGCTGGTGGTTGTGATCAACATGGCAACATTTTGAGCTCTTCTGAGCTTTATAATTCAGATACTGGCACTTGGGAGATTCTTCCAGACATGAACACACCAAGGAGAATGTGTTCTGCTGTGTTTATGGATGGAAAATTTTATGTCCTTGGTGGGGTTGGAGTTGACAAAACAACACAATTAACCTGTGGTGAGGAGTTTGATTTGAAGACAAGAAAGTGGCGCAAAATACCTAACATGTGCCCTTCTCGAAATGGAGGAGATGGTGCAAATCCGGTCAGTGGTGAAGCACCTCCTTTAATTGCAGTTGTAAACAATGTATTATTTGCTGCCGATTATGCACAACAAGTAGTAAAAAGATATGTCAAAGATCTAAACTCATGGGTCACCATTGGAAGCCTTCCTGATCGAGTAACCTCGTTAAATGGATGGGGAATGGCCTTCAGATCATGCGGAGATAAGCTAATTGTCATTGGAGGTCCTAGTCTTCATGGTGGAATGGTAACAGAAGTCAATGCTTGGGTAGTAGACGAAGGCTCACCACAATGGAATTTAGTTGCCATAATTCAATCAGGGAGCTTTGTGTATAATTGTGCTGTGATGGGATGTTGA 1137 0.4063 MSRKSIEILDDCMEGEKQKNVQKRADDSSLLIPPLSHDTSVNCLARLSRSDYGSIAVLNRSFRSLVKNGELYQLRRKMGIIEHWVYFSCDVLKWEAFDPNRDRLMQLPKMSSNTCFMLSDKESLAVGTELLVFGREITGPAIYKYSILTNSWLKGMKMNTSRCLFGSASLGEIAILAGGCDQHGNILSSSELYNSDTGTWEILPDMNTPRRMCSAVFMDGKFYVLGGVGVDKTTQLTCGEEFDLKTRKWRKIPNMCPSRNGGDGANPVSGEAPPLIAVVNNVLFAADYAQQVVKRYVKDLNSWVTIGSLPDRVTSLNGWGMAFRSCGDKLIVIGGPSLHGGMVTEVNAWVVDEGSPQWNLVAIIQSGSFVYNCAVMGC* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3045 378 Pfam Kelch motif 209 255 IPR006652 GO:0005515
Tpr5g3045 378 Pfam Kelch motif 161 207 IPR006652 GO:0005515
Tpr5g3045 378 SMART kelc_smart 173 220 IPR006652 GO:0005515
Tpr5g3045 378 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 16 378 - -
Tpr5g3045 378 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 16 378 - -
Tpr5g3045 378 SUPERFAMILY Kelch motif 91 375 IPR015915 GO:0005515
Tpr5g3045 378 Gene3D - 72 377 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3045 Tpr-Chr5 53359227 53360363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3045 35 254 Miscellaneous Gene Families AT4G33900 28.700 3.99e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3045 - - cam:101513734 577.015