Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3043 ATGAGGGGTGGTGGTGGTGGCAATGGCAGACCAGAAAGGAGAAGAAGAAGAAACTCAACCTCGCCGTTAAAGGATCGAACTGAAACTACTTCATCCAAATTATCTTCTTCTCCTCCTTCTTCTTCTTCTTCATCATCTAAACTAAGCTCTTCATCTTCTGCTACCACTCTCATCGATGATGATGACTCAAACGCTGTTCTATTCGACTATTACACTAACCCTAACCCTCGAAGCTTCCCTCACAGTGTTAAACAGAAATGTTGGGAAAAAGCTGACAAAGTCAAAGGACGTGACCCTGATCGATGGCGAAGGGATCCCCTTGGTAACCTTATCTTTCGTAAGCTCGTAGGTTGCCCTGGTTGTTTATGTCATGACTATGATCACATTGTTCCTTATTCTAAGGGGGGCAAAAGCACGCTGGAAAACTGTCAAGTATTACAGGCAAGAGTTAATCGGTCAAAGGGTAATCGAACAGATATCTCCAAATCAGATCTTATTCAGAAGAGTTCTTATTGCAGGGTTTCAGGCCGTGATATGGATCTTCTGGAATTATCTGCTTTTGGCAATGTTCAACATGGACAAGATACCGGAGGATGTAGAATTCAATAA 609 0.4269 MRGGGGGNGRPERRRRRNSTSPLKDRTETTSSKLSSSPPSSSSSSSKLSSSSSATTLIDDDDSNAVLFDYYTNPNPRSFPHSVKQKCWEKADKVKGRDPDRWRRDPLGNLIFRKLVGCPGCLCHDYDHIVPYSKGGKSTLENCQVLQARVNRSKGNRTDISKSDLIQKSSYCRVSGRDMDLLELSAFGNVQHGQDTGGCRIQ* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3043 202 MobiDBLite consensus disorder prediction 1 56 - -
Tpr5g3043 202 MobiDBLite consensus disorder prediction 24 56 - -
Tpr5g3043 202 Gene3D - 85 174 - -
Tpr5g3043 202 PANTHER HNH ENDONUCLEASE 12 202 - -
Tpr5g3043 202 PANTHER HNH ENDONUCLEASE 12 202 - -
Tpr5g3043 202 SMART HNH_5 106 152 IPR003615 -
Tpr5g3043 202 Pfam HNH endonuclease 124 157 IPR002711 GO:0003676|GO:0004519
Tpr5g3043 202 MobiDBLite consensus disorder prediction 7 23 - -
Tpr5g3043 202 CDD HNHc 110 155 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3043 Tpr-Chr5 53345306 53349118 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3043 - - gmx:100500174 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3043 5 53345306 53349118 Tpr5g3043 5 53345306 53349118 ECH