Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3030 ATGGTTGGAGACAAGGCAAAAAAGTTGAAAGTCACCGAAAATCCCGAAGAGGTCGATGCTGAACTCATCCTCTCCATCGAGAAATTGCAAGAGATCCAAGACGACCTCGAAAAGATCAATGATGAAGCAAGTGATAAGGTTCTGGAGATTGAGCAGAAATACAATGAGATAAGGAAACCGGTTTACGATAAGCGAAATGAGATTATCAAATCTATTCCTGATTTCTGGTTGAATGCTTTTTTGAGTCATCCTGCTCTTAGTGAACTTTTGAACGAGGAAGATCAAAAGGTATTCAAGTATTTGAGTTCTCTTGAGGTTGAAGACAATAAAGATGTCAAATCTGGATACACAATCACCCTTAATTTCAATCCCAATCCTTTTTTTGAGAATTCAAAACTTTCAAAGACTTTTACTTTCCTCGAAGAAGGAACAACAAAGATCACTGCTACCCCCATAAAATGGAAGGAGGGCAAGGAAATACCCAATGGCGTCAATCATGAGAAGAATGGGAACAAACGGGCTCCTTGTGATGACAGTTGTGGTAATGAATGCAGTTTCCTTAGTTGGTTTTCTGATTCTGACCCCGAGCAGAAAGATGATATGATTGACCTTCATGATGAGGTTGCCGAATTAATCAAGGATGATTTATGGTCAAATCCGCTCATTTATTTTAACAATGAGGAGCCTGATGAAGAGGATGCTGATGATGAAGCTGATGATGAGGAAAAAGATGAGGATGACTCTGAAGATGAGGATGAGGATGAGGGTGCCGACGAGGAAGGCAATTGA 789 0.4018 MVGDKAKKLKVTENPEEVDAELILSIEKLQEIQDDLEKINDEASDKVLEIEQKYNEIRKPVYDKRNEIIKSIPDFWLNAFLSHPALSELLNEEDQKVFKYLSSLEVEDNKDVKSGYTITLNFNPNPFFENSKLSKTFTFLEEGTTKITATPIKWKEGKEIPNGVNHEKNGNKRAPCDDSCGNECSFLSWFSDSDPEQKDDMIDLHDEVAELIKDDLWSNPLIYFNNEEPDEEDADDEADDEEKDEDDSEDEDEDEGADEEGN* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3030 262 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 255 IPR002164 GO:0005634|GO:0006334
Tpr5g3030 262 MobiDBLite consensus disorder prediction 222 262 - -
Tpr5g3030 262 Pfam Nucleosome assembly protein (NAP) 70 226 IPR002164 GO:0005634|GO:0006334
Tpr5g3030 262 SUPERFAMILY NAP-like 13 225 IPR037231 -
Tpr5g3030 262 MobiDBLite consensus disorder prediction 226 262 - -
Tpr5g3030 262 Gene3D - 2 72 - -
Tpr5g3030 262 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 255 - -
Tpr5g3030 262 Gene3D Nucleosome assembly protein 73 228 - -
Tpr5g3030 262 Coils Coil 231 251 - -
Tpr5g3030 262 Coils Coil 22 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3030 Tpr-Chr5 53236475 53242790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3030 K11290 - gmx:100810307 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3030 5 53236475 53242790 Tpr5g3030 5 53236475 53242790 PCT