Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3027 ATGGGAGGATCTGGATCTGGTGCCGGTAGTTTCTTTATGGTTCTTCTCAGAAATTTTGATGTTCTTGCTGGGCCTGTGATTAGTCTTGTTTATCCTTTATATGCTTCGGTTAGGGCAATTGAGAGCAAGTCTCCTCTGGATGATCAACAATGGCTAACTTATTGGGTTCTGTATTCCTTGATCACTCTTTTTGAACTCACTTTTGCCAAAATTCTTGAATGGATTCCAATATGGCCATATGCAAAGCTGATTCTAACCTGCTGGTTGGTCCTTCCTTATTTTACTGGCGCTGCTTATGTTTATGAGCATTATGTAAGACCCTTCTTGGCCAATCCTCAGACCATTAACATCTGGTATGTTCCAAGGAAAAAGGACGTCTTCTCTAAGCCAGATGACATCATAACTGCTGCAGAGAAGTACATCCAAGAAAATGGAACAGAAGCATTTGAGAATCTGATTCATAGGGCTGATAAATCAAAATGGGGCGGTAGTCATCATACAATGTATGATGAGACTTATTGA 522 0.4042 MGGSGSGAGSFFMVLLRNFDVLAGPVISLVYPLYASVRAIESKSPLDDQQWLTYWVLYSLITLFELTFAKILEWIPIWPYAKLILTCWLVLPYFTGAAYVYEHYVRPFLANPQTINIWYVPRKKDVFSKPDDIITAAEKYIQENGTEAFENLIHRADKSKWGGSHHTMYDETY* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3027 173 PANTHER HVA22-LIKE PROTEIN 7 163 - -
Tpr5g3027 173 Pfam TB2/DP1, HVA22 family 32 108 IPR004345 -
Tpr5g3027 173 PANTHER HVA22-LIKE PROTEINS 7 163 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3027 Tpr-Chr5 53194300 53196729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3027 K17279 - gmx:100808701 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3027 5 53194300 53196729 Tpr5g3027 5 53194300 53196729 ECH
Tpr2g1933 2 23231396 23235598 Tpr5g3027 5 53194300 53196729 PCT