Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3024 ATGTCGAAAAAGTCAAGTGAAATTCTAGATGATCCCATGGAAGAAGATACGCTGAAGAATGTTGAACATCATGGAGGTGACTCGTGTTTGCTTATTCCTCAGCTCACTCGTGATATATCAATTCAATGTCTACTTCGATTGTCAAGGTCTGATTATGACTCAATTGCTGCATTGAACCGAACTTTCCAGTCAGTTATTAAGACTGGAGAATTGTATCAACTTAGGCGAAAAATGGACATAGTTGAACATTGGGTTTACTTTTCTTGTGATGTCCTTAAATGGGAGGCCTTCGACCCAAATCGTGGTCGATTGATGCAGTTGCCTGAAATGACTTCCAATACATGTTTTATGCTTTCAGACAAGGAGTCATTAGCTGTTGGTACAGAGCTTCTTGTTTTTGGAAGGGAAATAACGGGTCCTGCCATATATAAATATAGCATTTTGACAAATTCATGGTTTAAGGGAATGAAAATGAATACTCCAAGATGCTTGTTTGGTTCTGCAAGTCTAGGAGAAATAGCAATATTAGCTGGCGGTTGTGATCAATTTGGCAACATCTTGAGATCTTCTGAGCTTTATAATTCAGAAACTGGCACTTGGGAGATTCTTCCAGACATGAACACAGCAAGGAAAATGTGTTCTGCTGTGTTTATGGATGGAAAATTTTATGTCCTCGGTGGGGTTGGAGTTGATAAAACATCACAGTTAACCTGTGGTGAGGAGTTTGATTTGAAGACAAGAAAGTGGCGAAAAATACCTAGCATGTGCCCTTCTCAAAACGGAGATGGTGCAAATTCGGTCAGTGGTGAGGCACCTCCTTTAATTGCAGTTGTAAACAATATATTATTTGCTGCTGATTATGCACAACAAGTAGTAAAAAGATATGTTAAAGATCAAAACTCATGGATCACCATTGGAAGTCTTCCTAATCGAGTAGCCTCTTTGAATGGATGGGGAATGGCCTTTAGGTCATGCGGAGATAAGCTGGTTGTCATTGGAGGTCTTAGTCTTCATGGTGAAATGGTAACAGAAGTCAATGCTTGGGTAGTAGACGAAGGCGCACCACAATGGAATTTGCTTGCCATAATTCAATCAGGGAATTTTGTGTTTAATTGTGCTGTGATGGGATGTTAA 1134 0.3977 MSKKSSEILDDPMEEDTLKNVEHHGGDSCLLIPQLTRDISIQCLLRLSRSDYDSIAALNRTFQSVIKTGELYQLRRKMDIVEHWVYFSCDVLKWEAFDPNRGRLMQLPEMTSNTCFMLSDKESLAVGTELLVFGREITGPAIYKYSILTNSWFKGMKMNTPRCLFGSASLGEIAILAGGCDQFGNILRSSELYNSETGTWEILPDMNTARKMCSAVFMDGKFYVLGGVGVDKTSQLTCGEEFDLKTRKWRKIPSMCPSQNGDGANSVSGEAPPLIAVVNNILFAADYAQQVVKRYVKDQNSWITIGSLPNRVASLNGWGMAFRSCGDKLVVIGGLSLHGEMVTEVNAWVVDEGAPQWNLLAIIQSGNFVFNCAVMGC* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3024 377 Gene3D - 72 376 IPR015915 GO:0005515
Tpr5g3024 377 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 14 377 - -
Tpr5g3024 377 SMART kelc_smart 129 172 IPR006652 GO:0005515
Tpr5g3024 377 SMART kelc_smart 173 220 IPR006652 GO:0005515
Tpr5g3024 377 Pfam Kelch motif 209 255 IPR006652 GO:0005515
Tpr5g3024 377 Pfam Kelch motif 161 207 IPR006652 GO:0005515
Tpr5g3024 377 SUPERFAMILY Kelch motif 91 374 IPR015915 GO:0005515
Tpr5g3024 377 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 14 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3024 Tpr-Chr5 53181215 53182348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3024 30 254 Miscellaneous Gene Families AT4G33900 26.754 6.92e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3024 - - cam:101513734 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3024 5 53181215 53182348 Tpr5g3024 5 53181215 53182348 ECH
Tpr2g1931 2 23218089 23220974 Tpr5g3024 5 53181215 53182348 PCT