Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3022 ATGTCTAAATTATCCTTAATGTTTTGTTCCCTGTTGGGGCTATTGGTTCTGTGTCAAGCAGGTGAAAATAAGAAGATTGGATTTTATGAATTGAAGAAAGGAAATATGAGAGTTAATTTCACAAACTATGGTGCTTCAATTATCTCTGTTTTTGTACCTGATAAAAATGGGAAATTAGCTGATGTTGCTCTTGGCTATGATTCCATTGAGGCTTATGAGACTGATACATGTTACTTTGGTGCTCTTATTGGGCGAGTGGCAAATAGAATTGGAGGAGCTCAATTCACTTTAGATGGAAAAACATACAAATTGCCAGCTAATGATCATGGAAACACACTCCATGGTGGAACCAAAGGGTTTGGTGATAATGTATGGACAGTAGAATCTCACGAAGAAGATAGTCATATAACATTTGTCTACAACAGTCACGATGGCGAAGAAGGTTTTCCAGGTAAAGTCGAGGTAAGTGTCACATACATGTTAATCGAGAAACACATATTGGGTGTGAAAATGATTGCCAAACCAATAGACAAAGCCACACCAATAAATCTAGCACAGCATACTTATTGGAACCTAGGAGGCCACGACAGTGGCGACATTCTTAATCACACCGTTCAAATCTTCGGTTCATCCATCACACCAGTAGACGACAAACTCATCCCAACAGGCAAACTCCAATCAGTGAAGGACACACCATATGATTTCCTTACACCAAAACCAGTTGGAAGTCGAATTCATGATCTTCCTGGTTTATATGACATCAACTACGTGCTCGACAAGACTAGTCAAAATCATTTGAGTAAGGTAGCTGCTGTGAGAGATCCTGTCTCAGGAAGGAAAATGGAGTTATGGTCAGACCAAGTTGGAGTACAGTACTATACTAGTGGCATGTTAGGGGATACTAAAGGAAAGGGTGGAGCTATGTATCATAAGTATGGTGGAATTGCTTTTGAGACACAAGGTTTTCCAGATTCAGTGAATCAACCTAGCTTTCCATCTCAGATTGTGAAACCTGGACAGACTTACAAACATATCATGGTTTATAGATTCACAGCTAGTTAA 1062 0.3945 MSKLSLMFCSLLGLLVLCQAGENKKIGFYELKKGNMRVNFTNYGASIISVFVPDKNGKLADVALGYDSIEAYETDTCYFGALIGRVANRIGGAQFTLDGKTYKLPANDHGNTLHGGTKGFGDNVWTVESHEEDSHITFVYNSHDGEEGFPGKVEVSVTYMLIEKHILGVKMIAKPIDKATPINLAQHTYWNLGGHDSGDILNHTVQIFGSSITPVDDKLIPTGKLQSVKDTPYDFLTPKPVGSRIHDLPGLYDINYVLDKTSQNHLSKVAAVRDPVSGRKMELWSDQVGVQYYTSGMLGDTKGKGGAMYHKYGGIAFETQGFPDSVNQPSFPSQIVKPGQTYKHIMVYRFTAS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3022 353 PANTHER ALDOSE-1-EPIMERASE 7 353 - -
Tpr5g3022 353 PIRSF GALM 16 353 IPR015443 GO:0016853|GO:0019318
Tpr5g3022 353 Gene3D - 17 352 IPR014718 GO:0030246
Tpr5g3022 353 CDD galactose_mutarotase_like 29 350 - -
Tpr5g3022 353 Pfam Aldose 1-epimerase 29 349 IPR008183 GO:0005975|GO:0016853
Tpr5g3022 353 PANTHER ALDOSE 1-EPIMERASE 7 353 - -
Tpr5g3022 353 SUPERFAMILY Galactose mutarotase-like 21 350 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3022 Tpr-Chr5 53169904 53172850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3022 2 352 Miscellaneous Gene Families AT3G47800 57.790 1.40e-151 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3022 K01785 - gmx:100807070 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3022 5 53169904 53172850 Tpr5g3022 5 53169904 53172850 ECH