Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3011 ATGGATCATCATCGTCAATGGCGTCCCAATTTCAATCCCATCAGACCAATCCAATACCAAAACAACAACAACAATCTCTGCCCTATTTGCTTCATCCAACATTTCCCTTTTTGCCCTCCACCACCACCTAACCCTAACATCGCTTACGATTCCGATTTCGATAGAACTTTCAAGAAACCAAGAATCCAAGACGATGAACGAAGATTGAAGCTTATTCGTGATCACGGTCTTAATCCTAATCCACCTCAATTTCAACATCCTCATCACGCTTACGTCACACCCTCACTCTCATCACAACCACCACCACCTCCACCGCCGCCACATCATCAATTTCCACCACCACCACCACCACCAATTTATCATCCTCAACAACACCACAGTGAAATCAATGCAACTTACCACGATCACAATTTTCAATTTCAACCATATCCAAATCATAATCATACTAATAATCAGAATTTGAATTCTAGAGAATTGAACCATCCTTATCCATATCCAAATCCTTACCCTAATGGTGGTAACAATAGTTTTTCGGATAATTCCGGTCAATTGGAAGGTTCTAGATTCTTCACGAACATGCCTCCTCTTCCTAATTCTCCTCCACCACCTCTACCAATGGATCCACCAGTTAATCACTTCAAAACCTACTTTTCTCCACCTAAGAAACCACCATCTCTATTTCCTGTTACTTCTTCTGTTTCTCATGAACCTCACCACTCACACCAACTTTATTTTCACAACAATAAACCTCACCTTCCTGAATTTCCCAGTGGGTTTCCTATGGAGGAACCTTTGAAACAGTACGCCGGAGATGGTCAACATTTTTCACAAAATCGAATTTGTGATGAGAAGCCGAAGTTTATTGATGCTTCCCAATTATTCCGGAATCCACTTCGAACTTCACGTCCTGATCATTTTGTGATCATACTTCGTGGTTTTCCAGGTAGTGGTAAGAGTTACTTGGCAAAGATGTTGCGTGATCTAGAGGTCGAAAATGGTGGTGATGCTCCACGAATTCATTCTATGGATGATTATTTTATGACTGAGGTTGAAAAGGTTGAGGATGATGGATCCAAATCTTCAAGTTCAGGAAGAAACAAGAGGCCTGTAATTAGAAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAAGCATTCAAGAAAACTGTTGAAGAGGGAGTTTTTACCTTTATTATAGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGTTACGAAGTTTACATTTTAGAAGCTACTTACAAGGACCCAGCGGGTTGTGCTGCAAGGAATGTCCATGGTTTTACACTGCAGGACATAGAAAAGATGGCTGAGCAATGGGAAGAAGCTCCATCCTTGTATCTGCAGCTTGATGCGAAGTCACTATTTCATGGAGATGATCTAAAAGAAAACAGAATACAGGAGGTTGACATGGATATGGACGATGATCTTGATGATGCTTTAGTTGCAGCTCAAGGAAGAGAAGCTGACAAAGCTGTTGACGACCCTCCTGTCAAGGACGATGATGGCTCCATAAAGGATGTGAAGAGATGGGATGCCGAAGAGGAACATCCAACGAAAGTCAGAGAACTGGGTAAAAGCAAATGGTCTGAAGATTTTGGTGAAGATGACATCGACCAAACGGAAGGTATGAAGGGCAATATTAATGCTCTGTCTGGGTTAATTCATCAATATGGCAAGGAACGAAAATCTGTACATTGGGGTGATAAGGTTGGCAAAACAGGATTTTCTATAGGCACTGCAAGGAAGGTAAATGCTTTGTCTTTGGTGATTGGACCTGGTGCTGGATACAACCTGAAGTCGAATCCATTACCTGAAGTGGAAAGTCCAACCCGAAATAGTGCAGAACCAAAGAAGCACAGCAAATTTCAAGAGCGAATACAGGCTGAACGTGAATCATTCAAAGCTGTCTTTGATGGGAGACGTCGACGGATTGGACTTAATGTAGAGGAGGACTGA 2037 0.4217 MDHHRQWRPNFNPIRPIQYQNNNNNLCPICFIQHFPFCPPPPPNPNIAYDSDFDRTFKKPRIQDDERRLKLIRDHGLNPNPPQFQHPHHAYVTPSLSSQPPPPPPPPHHQFPPPPPPPIYHPQQHHSEINATYHDHNFQFQPYPNHNHTNNQNLNSRELNHPYPYPNPYPNGGNNSFSDNSGQLEGSRFFTNMPPLPNSPPPPLPMDPPVNHFKTYFSPPKKPPSLFPVTSSVSHEPHHSHQLYFHNNKPHLPEFPSGFPMEEPLKQYAGDGQHFSQNRICDEKPKFIDASQLFRNPLRTSRPDHFVIILRGFPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEKVEDDGSKSSSSGRNKRPVIRKVMEYCYEPEMEEAYRSSMLKAFKKTVEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPAGCAARNVHGFTLQDIEKMAEQWEEAPSLYLQLDAKSLFHGDDLKENRIQEVDMDMDDDLDDALVAAQGREADKAVDDPPVKDDDGSIKDVKRWDAEEEHPTKVRELGKSKWSEDFGEDDIDQTEGMKGNINALSGLIHQYGKERKSVHWGDKVGKTGFSIGTARKVNALSLVIGPGAGYNLKSNPLPEVESPTRNSAEPKKHSKFQERIQAERESFKAVFDGRRRRIGLNVEED* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3011 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 306 471 IPR027417 -
Tpr5g3011 678 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 198 668 IPR026314 GO:0005634
Tpr5g3011 678 MobiDBLite consensus disorder prediction 629 652 - -
Tpr5g3011 678 Gene3D - 306 471 IPR027417 -
Tpr5g3011 678 MobiDBLite consensus disorder prediction 638 652 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3011 K17602 - gmx:100804293 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3011 5 53043229 53051204 Tpr5g3011 5 53043229 53051204 ECH