Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3007 ATGGCCAATGTTAGAGGTACTCCAAGGTATGGAGTTATAAGACCTATGGCACGCACTCCAGTTGTTGAAGAGATTGTACCTAATTCTGGATGGACAGAGGATTCTACTGGCCATTATCTTCTAGTGGATCTTCCTGAATTTGTGAAGGAAGATGTAAAGCTTCAAGTTGATAGCAGTGGCCGAATAGTTGTCAAGGGAGGAAGGCAGGCAAGTGAGCAAAAACGCGTTAATTTTCACCTGAGTTTTCCTGCGCCAGAGGATTCTGAGGTTGATAAGATAGCCGGAAAATTTGACGGGGGGATTCTTTACGTGACTCTCCCTAAGCGAATTGTACAAGAGAAGAACAAACAAAGTGACACAGAGGAGACTGGAATTAGAAGTGTGGAAAGAGCAGAAGAACATGATAGCCATAAAACCAAAGCTGATAGTGATGATGAAGGGAGAGACCATAATCAACATGAAGGGAGAGACCATAATCAACATGTTGGTCATGAAGTACACGAAGAAAGAAATCTTGGTCATGAAGAACACGAAGAAGAAAGAAATGAAAATGCGCACATACCGGATTTTACTGGACAAGTAACAAGAAAGTGGGATCAAGAAACCATGTTAAGAACTGCAGTGGATATTTTGAGTAAAAACAAAGGAATTGTTGTCACTGCTGTTATAGCCTTCTCCTTGGGGATGTATGTATCTAGTAAATTTCAATTTTCAGAAGCACCATAA 726 0.4091 MANVRGTPRYGVIRPMARTPVVEEIVPNSGWTEDSTGHYLLVDLPEFVKEDVKLQVDSSGRIVVKGGRQASEQKRVNFHLSFPAPEDSEVDKIAGKFDGGILYVTLPKRIVQEKNKQSDTEETGIRSVERAEEHDSHKTKADSDDEGRDHNQHEGRDHNQHVGHEVHEERNLGHEEHEEERNENAHIPDFTGQVTRKWDQETMLRTAVDILSKNKGIVVTAVIAFSLGMYVSSKFQFSEAP* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3007 241 Gene3D - 15 116 IPR008978 -
Tpr5g3007 241 MobiDBLite consensus disorder prediction 113 186 - -
Tpr5g3007 241 PANTHER INACTIVE PROTEIN RESTRICTED TEV MOVEMENT 2-LIKE 15 239 - -
Tpr5g3007 241 SUPERFAMILY HSP20-like chaperones 15 115 IPR008978 -
Tpr5g3007 241 PANTHER HEAT SHOCK PROTEIN 26 15 239 IPR045045 -
Tpr5g3007 241 CDD ACD_sHsps_p23-like 31 108 - -
Tpr5g3007 241 MobiDBLite consensus disorder prediction 113 194 - -
Tpr5g3007 241 Pfam Hsp20/alpha crystallin family 32 117 IPR002068 -
Tpr5g3007 241 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 20 123 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3007 Tpr-Chr5 53029859 53031298 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3007 - - cam:101491080 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3007 5 53029859 53031298 Tpr5g3007 5 53029859 53031298 ECH