Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3001 ATGGAAGAAGCTCAGGTGCAAGTTTGGGAAGGCTATGTAGATTGGAGGAACAAACCTGCCATCAAAGGACATCATGGTGGAATGCTTGCTGCCTCCTTTGTTTTGGCTGTGGAAGTATTGGAGAACCTAGCATATATTGCAAATGCAAGCAATCTTGTTTTATACCTTTCTAAGTTTATGCACTTTTCACCTTCAAACTCTGCCAACATTGTCACCAACTTCATGGGAACGGCTTTCCTACTTGCTATTCTTGGTGGATTTCTTGCTGATGCTTTTTTCACTACTTTTTCAATCTACCTTATAAGTGCTGCAATAGAATTCATGGGTCTACTAATGCTTACAATACAAGCTCACATACCACCACTCAAACCACCAAAATGTGTTATGGGAAGCACCAACAGTTTGTGCCAGACAATTCAAGGTGGAAAAGAAGCCATGTTATTTGCAGGACTCTATATGGTAGCACTTGGAGTAGGTGGAATAAAAGGTTCACTTCCTCCTCATGGTGCTGAGCAGTTTGATGAAACTACTACAGAAGGAAGGAAGAAAAGGTCTGAGTTTTTTAATTACTTTGTCTTCAGCTTGTCATGTGGTGCATTGTTTGCAGTTACTTTTGTGGTTTGGATTGAAGACAATAAGGGATGGCAATGGGGTTTAGGTGTATCAACTGCATCAATATTGCTCTCCATTCCAGTTTTTCTTCTTGGTTCACACAAGTATAGAACCAAGGTTCCAGCTGGAAGCCCTATCACACCTATGTTCAAGGTTCTTGTGGCGGCAATTTGCAACAACTACAAATCCAAAAATTCACCAACCAACGCTATAACCAGCATGCCAATAACTCCATCCTATACAGCCGAAATAGGAGATGGAGAACACACCAACACTAGGAAGGAAATAATGATAGATCAAACACCAATATCACAAAGCCTAAAATGCCTTAACAAATCAGTAATTGAACCAGTTCATTCAAAATTAAAATGCACAGTAAAAGAAGTAGAAGATGTGAAAATTGTATTAAAAATCCTTCCCATATTCATGTCAACCATAATGCTAAACTGTTGTTTAGCTCAATTATCAACATTTTCAGTTCAACAATCATCGACAATGAACACAATGCTCGGTTCATTCAAAGTCCCTCCAGCATCACTACCTGTATTCCCTGTCCTCTTCATCATGATCCTTGCACCACTCTACAACCATGTCATTGTTCCATTTGCTAGAAAAATAACCAAAACTGAAATGGGAATAACACATCTACAAAGAATAGGAATAGGGCTATTCCTATCAATTGTAGCTATGGCTGTTGCAGCATTAGTCGAAACAAAAAGGAAAAAAACAGCTTCAAAATTTGGTTTATTAGATTCAACAAAACCACTTCCAATAACATTCTTGTGGGTGGCTTTACAATATATGTTTTTAGGTTCAGCTGATCTTTTTACATTGGCTGGCATGATGGAGTTTTTCTTCACTGAAGCACCATGGAGTATGAGGTCTTTAGCAACAGCACTTTCATGGACTTCATTGGCTATGGGATATTTTCTTAGCACTGTTCTTGTTTCTGTTATTAATAAGGTCACTGGGGCATTTGGACAAACACCTTGGCTGCTGGGTGAAAACTTGAATCATTATCATCTTGAGAGGTTTTATTGGTTGATGTGTGTGCTTAGTGGACTTAATTTTGCTCATTATATATTTTGGGCTAATTCATACAAATATAAATCTTCACCAAATCATGGATACTAG 1746 0.3832 MEEAQVQVWEGYVDWRNKPAIKGHHGGMLAASFVLAVEVLENLAYIANASNLVLYLSKFMHFSPSNSANIVTNFMGTAFLLAILGGFLADAFFTTFSIYLISAAIEFMGLLMLTIQAHIPPLKPPKCVMGSTNSLCQTIQGGKEAMLFAGLYMVALGVGGIKGSLPPHGAEQFDETTTEGRKKRSEFFNYFVFSLSCGALFAVTFVVWIEDNKGWQWGLGVSTASILLSIPVFLLGSHKYRTKVPAGSPITPMFKVLVAAICNNYKSKNSPTNAITSMPITPSYTAEIGDGEHTNTRKEIMIDQTPISQSLKCLNKSVIEPVHSKLKCTVKEVEDVKIVLKILPIFMSTIMLNCCLAQLSTFSVQQSSTMNTMLGSFKVPPASLPVFPVLFIMILAPLYNHVIVPFARKITKTEMGITHLQRIGIGLFLSIVAMAVAALVETKRKKTASKFGLLDSTKPLPITFLWVALQYMFLGSADLFTLAGMMEFFFTEAPWSMRSLATALSWTSLAMGYFLSTVLVSVINKVTGAFGQTPWLLGENLNHYHLERFYWLMCVLSGLNFAHYIFWANSYKYKSSPNHGY* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3001 581 PANTHER PROTEIN NRT1/ PTR FAMILY 4.7 11 576 - -
Tpr5g3001 581 SUPERFAMILY MFS general substrate transporter 45 568 IPR036259 -
Tpr5g3001 581 CDD MFS_NPF4 28 568 - -
Tpr5g3001 581 Pfam POT family 100 536 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr5g3001 581 Gene3D MFS general substrate transporter like domains 1 578 IPR036259 -
Tpr5g3001 581 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 576 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3001 Tpr-Chr5 52999542 53003988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3001 3 576 Organic Solute Cotransporters AT1G69850 65.866 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3001 - K14638 gmx:100796577 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3001 5 52999542 53003988 Tpr5g3001 5 52999542 53003988 ECH