Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2995 ATGGAGAAAAATAACAAAGAAAGTGTGGAAATCAATGAAGCTCCAAAACTTAACTACAGAGGATGGAAGGTCATGCCATACATAATTGGAAATGAAACATTTGAGAAGCTAGGAGCAGTTGGTACCTTATCAAATCTGTTAGTTTATCTTACAACAGTTTTCAACCTTAGCAGTATTACAGCCACAAATATTGTCAATATCTTCAATGGAAGTGCCAGTTTAGCTACTTTGTTAGGAGCTTTTCTTTGTGACACTTATTTTGGTCGCTACAAAACACTTGGATTCTGCACATTTGCCTCCTTTCTGGGTTTACTTGTTATTCACCTAACAGCATGGATCAAAAGCATGCATCCACCTTCATGTGGAAATGAGAGAACCACATGCATAGATCCAACCACAGGACAAATGTCATTCCTACTACTTGGATTTGGATTTCTTATAGTAGGAGCTGCAGGGATTAGACCTTGTAACTTAGCATTTGGAGCAGATCAATTCAACCCAAATACTGAATCAGGAAAGAAAGGAATCAATAGTTTCTTCAATTGGTATTTTTTTACCTACACTTTTGCTCAAATGGTTTCTTTGTCATTGATTGTTTATATACAATCAAATGTGAGTTGGGCACTTGGTCTTGGAATTCCTGCTGCTTTGATGTTGTTTTCATGTGTTGTTTATTTCATGGGAAGTAAATATTATGTTAAAGTTCAAGCATCTGGTAGTCCTGTAACAAATATTGTTCAAGTTATAAATGTGGCTATAAAGAAAAGGAAACTTAATCTACAAGAGGATGAAGATTCATTGGTTACACTTTTTAGCTATATATCTCCTCACTCTATCAACTCGAATCTTCGACGTACACCTCAGTTCAGGTTCCTTGACAAAGCTGCTATTATAACCCCACAAGACAGTATAAACCCTGATGGTTCTGCATCTGATCCATGGAATCTATGCAGTATACAACAAGTAGAAGAAGTAAAATGCTTACTAAGAGTGCTACCAATTTGGCTTTCAGGCATACTTTACTATGTTGCATTAGTCCAACAGAACACAATGTTAGTCTTCCAAGCACTTCAATCCGATCGAAGAGTTTTCAACACCAATTTCAAAATCCCCGCAGCTTCTTACACGATATTCACAATGTTAAGCCTAACAATATGGTTACCAATCTACGACCGAATAGTTGTGCCAACAATTCGAAAATTCACTGGAAAAGAAGGCGGAATCACACTTCTACAAAGAATGGGAATTGGAATGTTTATTTCTATACTATGCATGTTAGTATCCGGCATAGTAGAAGCGCGAAGAAGGACTATGGCTATTAATAATCCTATTGGATTTGAACCGAGAAAAGGCGCGATTTCTTCTATGTCGGCTATGTGGTTGATTCCTCAGTTATTACTAGCAGGATTCTCTGATGCATTTTGTTTGGTTGGACAAGTTGAATTTTACTATAAACAGTTTCCTGAGAACATGAGAAGTCTCGCGGGATCGCTGTTTTTTTGCGGCTTGGCGCTATCGAGTTATTTTAGTAGTATGTTGATTTCGATTATTCATCACACAACGGCTAAATCTGCAGATGGAAATTGGTTACCACAAGATTTGAACAAAGGGAGATTGGATTACTTTTATTATGTGATTACTGCTTTGGAAGTGATTAATTTGGGTTACTTTATGTGGTGTTCAAGGTGGTATAGGTACAAAGGGGAAGATGATAATGGTGTTGAACTTGATCAAGTGTTGAAACAATCTGAAACAAAGATTAATGGTGTTTAG 1773 0.3694 MEKNNKESVEINEAPKLNYRGWKVMPYIIGNETFEKLGAVGTLSNLLVYLTTVFNLSSITATNIVNIFNGSASLATLLGAFLCDTYFGRYKTLGFCTFASFLGLLVIHLTAWIKSMHPPSCGNERTTCIDPTTGQMSFLLLGFGFLIVGAAGIRPCNLAFGADQFNPNTESGKKGINSFFNWYFFTYTFAQMVSLSLIVYIQSNVSWALGLGIPAALMLFSCVVYFMGSKYYVKVQASGSPVTNIVQVINVAIKKRKLNLQEDEDSLVTLFSYISPHSINSNLRRTPQFRFLDKAAIITPQDSINPDGSASDPWNLCSIQQVEEVKCLLRVLPIWLSGILYYVALVQQNTMLVFQALQSDRRVFNTNFKIPAASYTIFTMLSLTIWLPIYDRIVVPTIRKFTGKEGGITLLQRMGIGMFISILCMLVSGIVEARRRTMAINNPIGFEPRKGAISSMSAMWLIPQLLLAGFSDAFCLVGQVEFYYKQFPENMRSLAGSLFFCGLALSSYFSSMLISIIHHTTAKSADGNWLPQDLNKGRLDYFYYVITALEVINLGYFMWCSRWYRYKGEDDNGVELDQVLKQSETKINGV* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2995 590 Pfam POT family 96 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr5g2995 590 Gene3D MFS general substrate transporter like domains 2 572 IPR036259 -
Tpr5g2995 590 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 574 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr5g2995 590 SUPERFAMILY MFS general substrate transporter 38 567 IPR036259 -
Tpr5g2995 590 CDD MFS_NPF1_2 25 564 - -
Tpr5g2995 590 PANTHER PEPTIDE/NITRATE TRANSPORTER 11 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2995 Tpr-Chr5 52952435 52955884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2995 7 587 Organic Solute Cotransporters AT5G62680 58.163 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2995 - - gmx:100101839 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2995 5 52952435 52955884 Tpr5g2995 5 52952435 52955884 ECH