Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2983 ATGAAGACTGTTCTTTCTATAAGTTTCTTGTTTTGTTGCTCTCTTCTGTTCCTTCTTTTGGATTCTTCAACTTCACTTCCTCTATGTATTGATTCAAGGGCACCCTTTACCCTTAATACTACACTCAAGTTTTGTCCTTACAATGGAAGTACATGTTGCAACTCAATACAAGATGCACAAATACAGAAGCAGTTTCAACAGATGAATGTATCTGATAGTGCATGTTCCTCACTTTTGAAATCAATACTTTGTGCGAGGTGTGACCCTTATTCAGGAGAACTGTTTACAATTCAGTCCACAGCTAGATCAGTTCCTGTGCTTTGCAATTCTGCCATTCCATCAAATTCTTCTCAGTCAAAGGCATCACTACATGACTTCTGCTCTCAAGTATGGGATACATGTCGAACCGTGTCAATAATAAACTCACCATTTTCCCCTTCCTTACAAGGTGGAGGAGGATTACCAGCTAATAAAAATTCAACTAAACTGAATGAACTATGGCAGTCAAAAACCGATTTTTGTAATGCTTTTGGAGGAGCCTCCAGTAATGGATCGGTGTGCTTCGAGGGTGAACCTGTTGCATTAAATAACACTGATGCTCCAGTTATCCCTCCTCATGGCTTGTGCCTTGAGAAAATTGGGAATGGATCTTATATCAATATGGTTGCTCATCCCGATGGATCAAGCCGTGCGTTTTTCTCAAGTCAAATGGGAAAAGTTTGGTTAGCAACTATTCCGGAAGAGGGATCAGGAGGACAGTTGGAGCTTGATGAATCAAGTCCTTTTGTTGATCTAACTGATCAAGTTTATTTTGATACTCAATTCGGAATGATGGGAATGACATTTCATCCAAATTTCGCAAACAATGGTCGATTCTTTGCTTCGTTTAACTGTGATAAAGATAAATGGTCTGGATGCAATGGAATATGTTCTTGTAATTCAAACGTTAACTGTGATCCGTCAAAGATAGGTACTAGTAACGGCGCTCAACCATGTCAATATCAAACTGTTATTGCAGAATATACTGCTAATGGCACTGCATCTAATCCATCCTCGGCTGAAAGTGCTAAACCAACTGAGGTGAGAAGGATATTTACTATGGGCCTCCCATTTACATCTGACCATGCCGGTCAAATACTCTTCGGACCCGATGATGGTTATTTATACTTCATGATGGGTGATGGAGGAGGTGGTTCAGGTGATCCATACAATTTTGCTCAAAACAAGAAATCATTGCTCGGAAAGATTATGCGGCTTGATGTAGACAACATTCCAAGTGCATCAGAAGTTAGTAAACTTGGACTTTGGGGTAGCTACTCTATTCCTAAGGATAATCCATTCAGAGAAGATAAAGATTTAGAGCCTGAAATATGGGCCTTGGGATTAAGAAATCCTTGGCGATGCAGTTTTGATTCAGAAAAGCCTTCCTACTTTTTTTGTGCTGATACTGGACAGGATCTTTATGAAGAGGTGGATCTCATCACAAAAGGTGGAAACTATGGCTGGCGTGTTAACGAGGGACCGTATCCATTCACTGCTACAGAATCACCTGGAGGCAATACCTCCCTTAAATCCATAAATGCAATTCTCCCCATAGCAGGATACAACCATTCCCAAATAAACAAGAATGAAGGTTCAGCTTCGATTACCGGGGGATATGTTTACCGATCCACGACTGATCCTTGCATGTTTGGAAGGTACCTGTATGCTGATCTTTACGCGGGTGCAATTTGGGCCGCCACAGAAGACCCTGAAAACAGTGGAAATTTCACAACTAGCAAAATCCCTTTCGGCTGTGCACACGATTCTCCTATACCATGTGACTCAGGACCTGGTAGCCTTCCAGCTCTAGGATACATCTTTTCATTTGGGCAGGACAACAAGAAAGATGTTTATATTCTTGCAAGTACTGGCGTTTACCGAGTTGTTCCTCCAAGTCGCTGCAATTACACTTGCTCACTGGAAAAGGCGTCAACAGCTGTTCCTCCTTCTCCCTCTCCGTCTCACGCAAGCCATTTGAGTAACTTCAATGGATATCTGTTTCTGCAGCTTTCATCTTTGTTGTTGCTTTTGATGAGTTTCATATAG 2088 0.4148 MKTVLSISFLFCCSLLFLLLDSSTSLPLCIDSRAPFTLNTTLKFCPYNGSTCCNSIQDAQIQKQFQQMNVSDSACSSLLKSILCARCDPYSGELFTIQSTARSVPVLCNSAIPSNSSQSKASLHDFCSQVWDTCRTVSIINSPFSPSLQGGGGLPANKNSTKLNELWQSKTDFCNAFGGASSNGSVCFEGEPVALNNTDAPVIPPHGLCLEKIGNGSYINMVAHPDGSSRAFFSSQMGKVWLATIPEEGSGGQLELDESSPFVDLTDQVYFDTQFGMMGMTFHPNFANNGRFFASFNCDKDKWSGCNGICSCNSNVNCDPSKIGTSNGAQPCQYQTVIAEYTANGTASNPSSAESAKPTEVRRIFTMGLPFTSDHAGQILFGPDDGYLYFMMGDGGGGSGDPYNFAQNKKSLLGKIMRLDVDNIPSASEVSKLGLWGSYSIPKDNPFREDKDLEPEIWALGLRNPWRCSFDSEKPSYFFCADTGQDLYEEVDLITKGGNYGWRVNEGPYPFTATESPGGNTSLKSINAILPIAGYNHSQINKNEGSASITGGYVYRSTTDPCMFGRYLYADLYAGAIWAATEDPENSGNFTTSKIPFGCAHDSPIPCDSGPGSLPALGYIFSFGQDNKKDVYILASTGVYRVVPPSRCNYTCSLEKASTAVPPSPSPSHASHLSNFNGYLFLQLSSLLLLLMSFI* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2983 695 Pfam Glucose / Sorbosone dehydrogenase 230 507 IPR012938 -
Tpr5g2983 695 PANTHER HIPL1 PROTEIN-LIKE 1 693 - -
Tpr5g2983 695 PANTHER HEDGEHOG-INTERACTING PROTEIN 1 693 - -
Tpr5g2983 695 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 194 530 IPR011041 -
Tpr5g2983 695 Gene3D - 214 645 IPR011042 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2983 - - gmx:100778890 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2983 5 52831577 52836324 Tpr5g2983 5 52831577 52836324 ECH
Tpr5g2983 5 52831577 52836324 Tpr5g2983 5 52831577 52836324 PCT