LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g2982	ATGTCTCACGGATCTTCATCTCCGCTTCCCGCCGACCGATCATCGCCGTCGCCGGAACAACTTTCTCAAAAAGTGGAACAACAACCACCACCCGCCGCCGCTGCTCCTCTTCCTCCGACCACAAGAAGCAACCGTCCTTCCCGCGCGTGCACGATTCGTGCTGCTTCACGTCTTTATACCTCCTCGCAACCGGTAATTGAACGGAAACCGAAGAAGGACCAACGAAGGGAGAGGAGGAGGGAGGAGCAGGAGCAGGAGGAGGAGGAGGAGCCGGAAGAGTCTCCGCTGACGCAATGTAGTAAGATCGTTACGCCGTTGGTTGAACCGCCGTCTGAATCGCAGTTGCCACGGTGGAATCTTCGGTCTATGTGGGAGTTAGCTTCCGTGCTCAATTTTTTGAATTTATTTAGGCCTTTGTTGAATATCTCACTTGAATTCTCTGCTGAAGAGTTTGAGACTGCACTTCTTAACCCCAATGACACTTTGTTTTACATTCACATGCCTTTGTTAAAGGCAATCCCTCCTATTACACGAATGGCACTCACACGTGATACTTGGATAACCGTATTATGCAGAAAATTGAGAGATTGGTGGCATTGGGTTGCTGAGGGGGATCTTCCAATTGTTGCTTCACATGGGACGGAGATTGAAGTATATAAATCACTTGATCCAGCCGTCCGTGTTATCATTTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAATTATATTGACAACTCAATCAAACATGGTGCTCAACTTTCAACATTTCGTAAAGAGCGTATCGGAGGTGATTCAAATGGAATCTCTTATTGGTATGAAGATGACCCCATGATTGGCCATAGGTTGTATCGAGAAATAAGAAAAACTGAAGTGACTCAACCAAGGAAAGGGAAACCAAGAGGTTCACAGGTTCTTTCTAGTACATCATACCAGTGGGAAGCAGTTGCTACCAATTTTGATGAGTTTCAAGACGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACAGAGACTTCTGTGGGGAAAAAGCTGAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCACAAGAAAAAGGAGCGGTTGCTGAAAAAGCAACACAGAGAAGCTCTTCTTCTTGATAATTACATGATTGCTGACGGGATTTCTGCTGGGCGTGCACTTCGTGACAGGAAACCTGTAACCTACACTTTTGATGATTACGATCGATCCATCAATGAGGCAATTAAAGTAACCAAGCGGAATAAGTCATCCCCAGAACATATGCCTAGGAGAGAACCAGTAGCAAGACCTGAAGCTCTGACTAATGGTAACCATGGTCCTTCACATGCTGCAGAACAACAGAATTTTGGTATCTCATCTCCAGAATCATTCGACTCTGATGACGACGATGATGAATATGATAATACTGACAATTTGGACCGAAGTGGTCGTCGGAGAAGGAAACCTAAGCGGTATTCAGGGAATGAGTTTGTTGAAGAAGTATCAGATTATGAGGCAGAATTTGACAGTGATGATGATATTGTTGGAGAAGTTGTATATGATGAAGAATATCTCAAGAAACGTAAGCAGAGAAGGAAGCATTCTAGTAGCTCCGAAGGAGATGAAGAATATCAATGGGATGATGATAATGTAGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGATGAAGACTCGGCAAGCATGAGTGAGGATAGTGACAAACCCCGCAAAGTCAAACGATTGCCAGGCCGAACTAGGAGGGAAACTAAACTCAGGTCTGTGGGTGATATTCAATCAAGTCCAAGACGCAGTAAGAGGGCTACTAGAAATCGTATAAATTACAAACAATATGAGATGTCGGATTCAGAAACCGAGTTTACCAAACCTGGGAAGTCTAATGCATCAGCTGATCACTCAGATGCCAGCGAGAATGAGAATGAAAAACAGAATGAGAATGAGAATGGGGAATATGTGATGGAAAGTGAGGAATCAGATAGCATTGAAGATGAAGATCAGACAATGAAAGTAGAAGAGCCCGTTAGTGTTCCTTACCCTGTAGTAGAAGAAGAGAATGAAGATCAGAAAATGAAAGTAGAAGAGCCTGTTAGTCCTCCTGGTCAAGATGAAGTCGAGGGCACAGGAAAAAGACGTTTCCTTGATTTGAATGAACTTGCTCCTAGCCCTGGTTTTGACGATGGTCCAAATACAATAGTAAAAGATGAAGACAACGATTACTGA	2241	0.4378	MSHGSSSPLPADRSSPSPEQLSQKVEQQPPPAAAAPLPPTTRSNRPSRACTIRAASRLYTSSQPVIERKPKKDQRRERRREEQEQEEEEEPEESPLTQCSKIVTPLVEPPSESQLPRWNLRSMWELASVLNFLNLFRPLLNISLEFSAEEFETALLNPNDTLFYIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVAEGDLPIVASHGTEIEVYKSLDPAVRVIILKALCDIRVEQEDIRNYIDNSIKHGAQLSTFRKERIGGDSNGISYWYEDDPMIGHRLYREIRKTEVTQPRKGKPRGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTETSVGKKLKIDMLPEIEKVHKKKERLLKKQHREALLLDNYMIADGISAGRALRDRKPVTYTFDDYDRSINEAIKVTKRNKSSPEHMPRREPVARPEALTNGNHGPSHAAEQQNFGISSPESFDSDDDDDEYDNTDNLDRSGRRRRKPKRYSGNEFVEEVSDYEAEFDSDDDIVGEVVYDEEYLKKRKQRRKHSSSSEGDEEYQWDDDNVEEEEEEEEEEEEDEDSASMSEDSDKPRKVKRLPGRTRRETKLRSVGDIQSSPRRSKRATRNRINYKQYEMSDSETEFTKPGKSNASADHSDASENENEKQNENENGEYVMESEESDSIEDEDQTMKVEEPVSVPYPVVEEENEDQKMKVEEPVSPPGQDEVEGTGKRRFLDLNELAPSPGFDDGPNTIVKDEDNDY*	747

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	66	83	-	-
	Tpr5g2982	746	PANTHER	REMODELING AND SPACING FACTOR 1	24	745	IPR028938	GO:0006355\|GO:0031213
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	1	101	-	-
	Tpr5g2982	746	PANTHER	DDT DOMAIN-CONTAINING PROTEIN DDR4	24	745	-	-
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	521	746	-	-
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	541	569	-	-
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	462	491	-	-
	Tpr5g2982	746	Pfam	WSTF, HB1, Itc1p, MBD9 motif 1	219	249	IPR028942	-
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	521	540	-	-
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	415	433	-	-
	Tpr5g2982	746	Coils	Coil	550	570	-	-
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	639	656	-	-
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	415	435	-	-
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	657	673	-	-
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	1	27	-	-
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	40	63	-	-
	Tpr5g2982	746	MobiDBLite	consensus disorder prediction	689	719	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr5g2982	Tpr-Chr5	52812985	52820071	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g2982	-		-	gmx:100795519	992.645

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr5g2982	5	52812985	52820071	Tpr5g2982	5	52812985	52820071	ECH
	Tpr5g2982	5	52812985	52820071	Tpr5g2982	5	52812985	52820071	PCT