Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2981 ATGTTGTCCCTAAAAATGACTGAGATGTGGACAACAATGGGATCAACCTTAGCAAGTTTAATGTTCATTTGGGCTATCATAAGACAATATTGTCCATACCAACTTCTACGTTTCTTTGAAAAATATAGTCATAGAATCATGGACTATTTCTACCCTTACATAAGAATCTCATTCCATGAATTCTTAGGTGATAGACTCAAAAGAAGTGATGCTTATGGTGCTGTTGAAGCTTATCTAAGTGCTAACACATCAAAGAGTGCAAAAAGACTCAAAGCTGAGATTGGAAAAGATAGCACTAACTTAGTCTTAACAATGGATGAATATGAAAGAGTAACTGATGATTACAAAGGTGTAAAAGTTTATTGGGTTTGTAGCAAAGTTATGTCAAATTCAAGATCCATGCCTTATTATCAAGAACAAGAGAAAAGATTCTACAAGTTAACTTTTCACAAGAAGTATAGAGATACAATAACTGGTTCATATTTGGATCATGTGATGAAAGAAGGGAAAGAGATTCGTTTGAGGAATAGACAGAGAAAATTGTATACAAATAGTCCTGGTTATAAATGGCCAAGTTATAAGCAAACTATGTGGAGTCACATTGTTTTTGAACATCCTGCAACATTTGAAACAATGGCTATGGAACCAGAGAAGAAAAAAGAGATTATTGAAGATTTGGTTACTTTTAGTAAAAGTAAGGATTTTTATGCTAGGATTGGAAAAGCTTGGAAAAGGGGTTATTTACTTTTTGGTCCTCCAGGTACTGGAAAATCAACTATGATTGCTGCTATGGCTAATTTGTTGGGTTATGATGTTTATGATTTGGAGTTAACAGCAGTGAAAGATAACACTGAGTTAAGGAAGCTTTTGATTGAAACAACTAGTAAGTCAATAATTGTTATTGAAGATATTGATTGTTCACTTGATCTTACAGGTCAAAGAAAGAAAAAAGGTGAAAGTAAGTTTTTTTCTGATGATGAGAATGAAAATAAGGTGAATATTGATGTTTTAAGGAAGGAGGTGAAGGAAGAAGGAAGTGGAGGTGGGAATAGTAAAGTTACACTTTCAGGGCTATTGAATTTCATTGATGGAATTTGGTCAGCTTGTGGAGGTGAAAGGTTGATTGTTTTCACAACTAATTATGTGGAGAAGCTTGATCCTGCATTAATTAGGAGGGGTAGAATGGACAAACATATTGAACTTTCTTATTGTAGTTTTAATGGTTTTAAAGTGCTTGCTAATAATTACTTAAGAGTTGAAAATCATGTATTGTTTGATAGTATTGAGAAGCTTATTGGTGAAGTTAAGATTACACCTGCTGATGTTGCTGAGAATCTTATGCCTAAGTCTCCTATGGATGATGCTGATAAGTGTCTTTCAAATTTGATTGAAGCTCTTGAGGAGATGAAACAAAGTAGTAAAATTAAGGAACAAGATGATGAAGTTGAACACATTGGTGCTATTAAGGAAAATGGTGAGTTTGTTGATGATGATGCTGATGATGACAAAGAAATTGATCAAGAAATGAAGCAAATTCAGAGATAG 1545 0.3353 MLSLKMTEMWTTMGSTLASLMFIWAIIRQYCPYQLLRFFEKYSHRIMDYFYPYIRISFHEFLGDRLKRSDAYGAVEAYLSANTSKSAKRLKAEIGKDSTNLVLTMDEYERVTDDYKGVKVYWVCSKVMSNSRSMPYYQEQEKRFYKLTFHKKYRDTITGSYLDHVMKEGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMAMEPEKKKEIIEDLVTFSKSKDFYARIGKAWKRGYLLFGPPGTGKSTMIAAMANLLGYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGESKFFSDDENENKVNIDVLRKEVKEEGSGGGNSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCSFNGFKVLANNYLRVENHVLFDSIEKLIGEVKITPADVAENLMPKSPMDDADKCLSNLIEALEEMKQSSKIKEQDDEVEHIGAIKENGEFVDDDADDDKEIDQEMKQIQR* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2981 514 Gene3D - 203 398 IPR027417 -
Tpr5g2981 514 MobiDBLite consensus disorder prediction 486 514 - -
Tpr5g2981 514 CDD AAA 244 403 - -
Tpr5g2981 514 Coils Coil 452 479 - -
Tpr5g2981 514 PANTHER ATP BINDING PROTEIN 7 485 - -
Tpr5g2981 514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 468 IPR027417 -
Tpr5g2981 514 Pfam ATPase family associated with various cellular activities (AAA) 248 402 IPR003959 GO:0005524|GO:0016887
Tpr5g2981 514 PANTHER BCS1 AAA-TYPE ATPASE 7 485 - -
Tpr5g2981 514 ProSitePatterns AAA-protein family signature. 373 392 IPR003960 GO:0005524|GO:0016887
Tpr5g2981 514 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Tpr5g2981 514 SMART AAA_5 243 405 IPR003593 -
Tpr5g2981 514 Gene3D - 399 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2981 Tpr-Chr5 52809848 52811955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2981 208 401 Miscellaneous Gene Families AT5G58870 29.208 2.55e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2981 - - gmx:100798981 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2981 5 52809848 52811955 Tpr5g2981 5 52809848 52811955 ECH