Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2979 ATGTCACACCGTCCTTCTCGGCGGCGAAACACAGCACCGCCGGAGCCAACTCCACCTTCAGCTTCAGCTCCGGCAAAGCACCCTAAACCCACCACCACTAAAAACACTATCTTTTCACCTTCACCTTCTCATTCTCACTACCCAAAGCCAAACCAAGATTTGATTCAAGCTACTAAATCATCTTTTTTAGTTAAACCTTTTCAAAGTCTTAACTTAGGTAGTAGAAAAACCAAACAACCTCAAACAAAACATGTTGACACACGTTTACAAACTAAATCCATGACAACTTCTGCTATATTTGATTCCTCAAAACCCAACAACACAAAAAACATAGTACAAACACCAAAAGTTGAAAAAGATAGTATTTTTTTGAATTCTAAAAGGACCCATAAAGAGAAACCACAAAAAACTAGTTCAGAATTGGAAAAATGGAAACTTCAGGGGTTGTTGAAGAATGAGAAGAAGGAATCTTATAAAGGGTGTGTGGTTGAAGATGTTAAGGTTGAAAAAACAAGGAAAGTGGAAGAAGGTGATGTTGTTAAGGAGAGAGTTTCTGTTTCTTTGGGTCAAAGTGGTGGTAGAAGAAGATCTTTATGTGGGTCAATGATTGAGTTAGGTGATTTCTTTGCAATTAATGGTGCAAAAATGGTTTCAGCGGATATGCCACCATTTATGCAGATCCATGCTGTTGATTGTGCTAGAAAGGCCTTTGATAGTATGGAGAAGTTCACTTCCAAAACCCTTGCATTATCCCTCAAAAAGGAATTTGATGGAGTGTATGGGCCGGCATGGCACTGTATTGTGGGGACTAGTTTTGGATCATTTGTGACTCATTCAGTTGGAGGGTTTCTATATTTCTCAATGGATCAAAAATTGTACATCCTTTTATTTAAGACTGCTGTACAAAAAGCTGATTAA 918 0.3834 MSHRPSRRRNTAPPEPTPPSASAPAKHPKPTTTKNTIFSPSPSHSHYPKPNQDLIQATKSSFLVKPFQSLNLGSRKTKQPQTKHVDTRLQTKSMTTSAIFDSSKPNNTKNIVQTPKVEKDSIFLNSKRTHKEKPQKTSSELEKWKLQGLLKNEKKESYKGCVVEDVKVEKTRKVEEGDVVKERVSVSLGQSGGRRRSLCGSMIELGDFFAINGAKMVSADMPPFMQIHAVDCARKAFDSMEKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTAVQKAD* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2979 305 PANTHER INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE 1 305 - -
Tpr5g2979 305 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 210 300 IPR037177 GO:0007017|GO:0030286
Tpr5g2979 305 MobiDBLite consensus disorder prediction 11 25 - -
Tpr5g2979 305 Pfam Dynein light chain type 1 215 299 IPR001372 GO:0007017|GO:0030286
Tpr5g2979 305 MobiDBLite consensus disorder prediction 26 60 - -
Tpr5g2979 305 SMART Dynein_light_2 209 299 IPR001372 GO:0007017|GO:0030286
Tpr5g2979 305 MobiDBLite consensus disorder prediction 1 60 - -
Tpr5g2979 305 PANTHER DYNEIN LIGHT CHAIN 1 305 IPR001372 GO:0007017|GO:0030286
Tpr5g2979 305 SUPERFAMILY DLC 212 299 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2979 Tpr-Chr5 52792027 52794193 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2979 - - aip:107633823 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2979 5 52792027 52794193 Tpr5g2979 5 52792027 52794193 ECH