Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2974 ATGGCGACTCGACCGATTATTAGTTTTGTTGAGCAATACTTAGGAAAGTTTCCACATTTTGTGTTATGCATGGTGCTTGAATGGGTGATGACAATTTCATTCTTCATTGATGGGTTTCTTACATTTTTCACCACCGAGTTTGCAAGATTCTTTGGTTTGGATATCCCGTGTTGGCTATGCGCCAAAATGAATCATGTCTTGGCTCACAAGACTCCTATTTTTTATTACAACCATTCCATGTGCGAAACTCATAAGAAAGATGTTTCGTATTTGGCGTTTTGTCATAATCATAAGAAGATTTCTGATATAAGGAAGATGTGTGAAGGATGTTTGCTTTCATTTGCAACGCAGAAGGAATCGGATTATGATACCTATAAGTCTCTTGTAGAGGTTCTCAATAGGAATCTTGAGTGCTTTGTCGATGATGGCAAAAATATTCAATTGAGATTGAAGTATGAAGGAGTCTTGCAGGTTGAGAAAGGCAATACTCAGATGTGTTCATGTTGTGGAGCACCATCGAAACTCAAGTCTTCTATCCCAAAATGCAAAAATTCAGGTTCATTTTTACAAGCTTCATCGCAAGCTCATCCATTCGTCACTTCAAAATATGAGGAATCCTGCGATCTGGATTCGCCTCAAATCATGTATGCGAAAAAAGACTCAGAACTTCCACAGAATGAGGATGACAGCAACCTGAAAAATCAGAATATTCAATTAAAGGAAGAAGTATCGAAAGGCACTTCTTTGCCTCTATTGACAGAATCCGGCGTAGAGTCCCCGAAAACACCGTCTTTGCCATGGGGAAACAGGATCGTGGGAGTCCCACGTACAGATTCTCCAAACAACAGTCCAAGATGGTCTTCTGGGGACAGCAAGATATCATCTCTAGATAAGTCGCAATTTTCCTCCTCTGACTCTATCAACGGGGATTATCAAAATGAAGTAGCCATTGCCGTCGTAAACAATTTGAAGAAGCAAGTTCGTTTGGATCGTAAGTCCCTCAAGGATTTGTACACGGAGCTGGATGAAGAGAGAAGTGCTTCAGCTGTTGCTGCTAACAATGCAATGGCCATGATCACGCGCTTACAGGAAGAGAAAGCGACTTTGCAGATGGATGCTTCACAGTATCAAAGAATGATGGAAGACCAAATAGAGTATGATGAAGAGGTCTTGCAAGAAACTAATGATTTGCTTATCAAACTTGAGGAAGAAGTCAAAACTTTAGATACTGAATTGGATATTTACAGAAATAAATATGGATACTTAACAAGAGATGATATTATGGCTCATGGTGGCAACGACGTTTCAACCAGGTCCGTTGAAGGTGAGGATGATGTGGAGAAAGACCTTGATCTTGATCAACCTGCTTCGCCACAGGTGGATAATGGAGGGGGAAAGATCAAGGAGACACTAAAAGATTTCAGAATGGAAAGAACATATCTTCTTGGCCTAAAGAAAATGGAAAACGGAACTCCCTTGACAGAGAATGAAATCTGA 1497 0.4035 MATRPIISFVEQYLGKFPHFVLCMVLEWVMTISFFIDGFLTFFTTEFARFFGLDIPCWLCAKMNHVLAHKTPIFYYNHSMCETHKKDVSYLAFCHNHKKISDIRKMCEGCLLSFATQKESDYDTYKSLVEVLNRNLECFVDDGKNIQLRLKYEGVLQVEKGNTQMCSCCGAPSKLKSSIPKCKNSGSFLQASSQAHPFVTSKYEESCDLDSPQIMYAKKDSELPQNEDDSNLKNQNIQLKEEVSKGTSLPLLTESGVESPKTPSLPWGNRIVGVPRTDSPNNSPRWSSGDSKISSLDKSQFSSSDSINGDYQNEVAIAVVNNLKKQVRLDRKSLKDLYTELDEERSASAVAANNAMAMITRLQEEKATLQMDASQYQRMMEDQIEYDEEVLQETNDLLIKLEEEVKTLDTELDIYRNKYGYLTRDDIMAHGGNDVSTRSVEGEDDVEKDLDLDQPASPQVDNGGGKIKETLKDFRMERTYLLGLKKMENGTPLTENEI* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2974 498 Coils Coil 352 379 - -
Tpr5g2974 498 MobiDBLite consensus disorder prediction 275 297 - -
Tpr5g2974 498 MobiDBLite consensus disorder prediction 433 468 - -
Tpr5g2974 498 MobiDBLite consensus disorder prediction 248 262 - -
Tpr5g2974 498 ProSiteProfiles GTD-binding domain profile. 318 416 IPR007656 -
Tpr5g2974 498 PANTHER MYOSIN-BINDING PROTEIN 6-RELATED 1 489 - -
Tpr5g2974 498 Coils Coil 384 418 - -
Tpr5g2974 498 MobiDBLite consensus disorder prediction 248 297 - -
Tpr5g2974 498 Pfam Zein-binding 322 412 IPR007656 -
Tpr5g2974 498 Coils Coil 324 344 - -
Tpr5g2974 498 PANTHER MYOSIN-BINDING PROTEIN 2 1 489 IPR039306 GO:0017022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2974 Tpr-Chr5 52758557 52760964 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2974 - - lja:Lj4g3v1598220.1 570.852