Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2958 ATGGCGTTAAGCAAGCTTCTTGTGTTGGGGTTGTTACTTCTAGTGTGCATCTCTAAGATTTCATCTGATCATGAGATAGAAATGGAAGAAGATGATGAACTTCAGTTACCTGATGATAAGCTGCTTATTGTCCGAGACGGAAACAGAAGGCTAATGTCTGACATAGATTGTGGAGGATTATGTGGGTCTCGGTGCAGTGTGCATTCAAGGCCCAACTTATGCAAAAGGGCATGTGGGACTTGTTGTGTGAGGTGCAAATGTGTTCCACCTGGTACTTCTGGCAATAGAGAGTTTTGTGGGGCTTGTTACACTGATATGGTCACTCATGGCAACAAGACCAAGTGCCCTTAG 351 0.4444 MALSKLLVLGLLLLVCISKISSDHEIEMEEDDELQLPDDKLLIVRDGNRRLMSDIDCGGLCGSRCSVHSRPNLCKRACGTCCVRCKCVPPGTSGNREFCGACYTDMVTHGNKTKCP* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2958 116 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 7 116 - -
Tpr5g2958 116 Pfam Gibberellin regulated protein 56 116 IPR003854 -
Tpr5g2958 116 PANTHER GIBBERELLIN-REGULATED PROTEIN 2-RELATED 7 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2958 Tpr-Chr5 52548598 52550353 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2958 - - gmx:100793143 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2958 5 52548598 52550353 Tpr5g2958 5 52548598 52550353 ECH
Tpr5g2958 5 52548598 52550353 Tpr5g2958 5 52548598 52550353 PCT