Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2953 ATGGCAGGAGGTGGTGGTGGTGGAGGAGCTCCGGCACCAAAAGCAGATGAGCCACAGCCACATCCACCAAAGGATCAGCTACCAAATGTTTCTTATTGCATAACAAGTCCTCCACCTTGGCCTGAGGCCATACTTCTTGGTTTTCAACATTATCTTGTGATGCTGGGAACAACCGTGTTAATTCCTACTTCTCTCGTTCCTCAGATGGGAGGTGGCAATGAGGAGAAAGCTAAAGTTATCCAAACACTACTCTTTGTGGCTGGAATCAACACATTGGTGCAAACTTTGTTTGGAAGCCGATTGCCTGCAGTAATCGGAGGGTCGTATACCTTTGTTCCGACAACAATCTCAATCATTCTTGCTGGTCGATTCAATGATGAGCCAGATCCTATAGAGGTTTGTATGAGAACAATTCTTGCTATAAATTGTGCAAAGTTGATACATCATTCACTTGCTTGGTACATGAACTGTTCGATAACTGTCTTTACCGGATTTTTTTGCTTTATTTTCTCTATGCAGAAATTCAAGAAGATAATGCGGGCAACCCAAGGTGCTCTTATTGTTGCTTCAACCCTTCAAATAGTACTAGGGTTTAGTGGTCTTTGGCGTAATGTTGCAAGGTTCTTAAGTCCACTTTCAGCAGTTCCTTTGGTTTCTCTTGTTGGTTTTGGGCTGTATGAGTTGGGCTTTCCTGGGGTTGCTCAATGTGTAGAGATTGGATTGCCAGAACTTGTTTTGCTAGTATTTGTTTCACAGTTTGTACCCCATGTGCTCCATTCTGGAAAACATGTCTTCGACCGTTTCTCTGTTTTATTCACGGTTGCAATTGTCTGGTTATATGCTTATATTCTCACCGTTGGAGGGGCCTATAACCACGTTAAACATAAAACACAGATAACCTGCCGCACTGATCGTTCTGGCCTAATAGATGCTGCTCCATGGATTCGTGTTCCGTATCCATTTCAATGGGGTGCACCTTCATTTGATGCGGGTGAAGCCTTTGCCATGATGATGGCATCCTTTGTTGCTCTAGTAGAGTCCAGTGGAGCTTTTATTGCTGTTTACCGGTTCGCAAGTGCAACACCATTACCACCATCAATTCTTAGTCGTGGTATTGGTTGGCAGGGTGTTGGCATTCTGTTATCAGGATTGTTTGGAACCGGCATTGGATCTTCTGTATCTGTAGAAAATGCTGGTCTTTTGGCTTTGACACGTGTTGGCAGTCGAAGAGTGGTGCAAATATCCGCCGGGTTTATGATTTTCTTTTCAATTTTAGGAAAATTTGGAGCAGTATTCGCATCCATCCCCCCTCCCATTGTTGCAGCACTATACTGCTTGTTCTTTGCTTATGTTGGTTCGGGAGGTCTAAGTTTTCTTCAATTCTGCAACCTCAATAGTTTTAGGACAAAGTTTGTATTAGGCTTCTCCATCTTCCTGGGCTTATCTATCCCACAGTACTTCAATGAGTATACAGCAATTAATGGTTTCGGTCCAGTTCACACCGGAGCAAGATGGTTCAATGATATAGTAAATGTGCCATTCCAATCAAAAGCATTTGTTGCTGGAGTCGTGGCATATTTCTTGGATAACACGCTACATAAGAAAGAATCTGCTATTCGGAAAGATAGAGGAAAGCATTGGTGGGACAAGTACAGGTCCTTCAAAACTGACACAAGAAGCGAGGAGTTTTATTCACTGCCTTTCAATCTAAACAAATACTTCCCATCTGTGTAA 1734 0.4291 MAGGGGGGGAPAPKADEPQPHPPKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGINTLVQTLFGSRLPAVIGGSYTFVPTTISIILAGRFNDEPDPIEVCMRTILAINCAKLIHHSLAWYMNCSITVFTGFFCFIFSMQKFKKIMRATQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAQCVEIGLPELVLLVFVSQFVPHVLHSGKHVFDRFSVLFTVAIVWLYAYILTVGGAYNHVKHKTQITCRTDRSGLIDAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRFASATPLPPSILSRGIGWQGVGILLSGLFGTGIGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIVAALYCLFFAYVGSGGLSFLQFCNLNSFRTKFVLGFSIFLGLSIPQYFNEYTAINGFGPVHTGARWFNDIVNVPFQSKAFVAGVVAYFLDNTLHKKESAIRKDRGKHWWDKYRSFKTDTRSEEFYSLPFNLNKYFPSV* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2953 577 MobiDBLite consensus disorder prediction 1 22 - -
Tpr5g2953 577 Pfam Permease family 42 136 IPR006043 GO:0016020|GO:0022857|GO:0055085
Tpr5g2953 577 Pfam Permease family 143 487 IPR006043 GO:0016020|GO:0022857|GO:0055085
Tpr5g2953 577 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 171 577 - -
Tpr5g2953 577 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 7 151 - -
Tpr5g2953 577 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 7 151 - -
Tpr5g2953 577 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 171 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2953 Tpr-Chr5 52504647 52510627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2953 12 577 Organic Solute Cotransporters AT5G49990 74.780 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2953 - - gmx:100791553 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2953 5 52504647 52510627 Tpr5g2953 5 52504647 52510627 ECH
Tpr5g2953 5 52504647 52510627 Tpr5g2953 5 52504647 52510627 PCT